Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC015799.1-201ENST00000622996 3122 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC096921.2-201ENST00000561507 1916 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RNU1-59P-201ENST00000364829 162 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 MIR188-201ENST00000385034 86 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 YWHAZP6-201ENST00000399764 738 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RNA5SP198-201ENST00000410376 127 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RN7SKP86-201ENST00000410454 332 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 HMGA1P8-201ENST00000414130 321 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC245052.5-201ENST00000416320 649 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 ATG4AP1-201ENST00000416893 538 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC007435.1-201ENST00000421086 415 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC007562.1-201ENST00000421819 517 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 OR6K4P-201ENST00000423179 955 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 OR5W1P-201ENST00000423705 938 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 TMX2P1-201ENST00000436507 708 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 YWHAZP2-201ENST00000440317 728 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC016908.1-201ENST00000442571 1219 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC023274.2-201ENST00000445264 521 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 NANOGNBP1-201ENST00000448444 480 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 FGF7P6-202ENST00000451282 293 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 DDX39BP2-208ENST00000453923 258 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC073594.1-201ENST00000462065 364 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RPL31P58-201ENST00000469001 379 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RN7SL326P-201ENST00000477493 296 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 OR4G11P-201ENST00000492842 939 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 YWHABP2-201ENST00000540201 713 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL078601.3-201ENST00000573303 535 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 MIR3189-201ENST00000578735 73 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 GLYATL1P2-202ENST00000588046 902 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL359091.2-201ENST00000609303 556 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 U1.25-201ENST00000614085 162 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC090517.2-201ENST00000614966 680 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 U1.34-201ENST00000618578 162 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AC069209.1-201ENST00000619282 651 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 U1.31-201ENST00000620022 160 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL683826.1-201ENST00000624104 627 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 LINC01739-205ENST00000641890 573 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 AL133243.2-201ENST00000610331 1621 ntBASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SEC61A2Q9H9S3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 Y_RNA.70-201ENST00000362886 110 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 TPT1P2-201ENST00000413105 503 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AL035422.1-201ENST00000414193 397 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC094019.1-201ENST00000434678 472 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms