Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC009120.2-204ENST00000621548 2032 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC137056.2-201ENST00000624055 1958 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 MTCO1P23-201ENST00000415223 1526 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RNA5SP188-201ENST00000362916 129 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RNU6-660P-201ENST00000364566 109 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 Y_RNA.509-201ENST00000384506 99 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 Y_RNA.573-201ENST00000384763 105 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AL023284.3-201ENST00000407767 334 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RN7SKP281-201ENST00000410472 352 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RPL21P50-201ENST00000417698 477 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 LINC01347-201ENST00000417964 355 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 OSTCP4-201ENST00000424397 449 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC104843.2-201ENST00000427666 297 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 SUMO2P8-201ENST00000434672 286 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 LDHAP2-201ENST00000437325 985 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC093019.1-201ENST00000443135 252 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 HMGB1P16-201ENST00000447155 540 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC093166.3-201ENST00000448785 303 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC013267.1-201ENST00000458227 267 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 PNPLA4P1-201ENST00000458328 305 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RN7SL552P-201ENST00000462094 276 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 HMGN1P16-201ENST00000508308 283 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 UGT2A3P7-201ENST00000510485 734 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 OR51A1P-201ENST00000511110 946 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 RNU6-358P-201ENST00000516564 75 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 YWHABP2-201ENST00000540201 713 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC023310.2-201ENST00000553844 547 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 GTF2IP22-201ENST00000554443 182 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AL133457.1-201ENST00000564251 987 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC002519.2-203ENST00000567043 837 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC023158.2-201ENST00000614876 543 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AP003789.1-201ENST00000617737 605 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 AL121936.2-201ENST00000641935 662 ntBASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.35□□□□□ -1.55
SSBP3Q9BWW4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms