Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MTCO1P18-201ENST00000455518 1419 ntBASIC5.65□□□□□ -1.5
SMOQ99835 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMOQ99835 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.65□□□□□ -1.5
SMOQ99835 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SMOQ99835 MSL3P1-202ENST00000440028 1468 ntBASIC5.65□□□□□ -1.5
SMOQ99835 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMOQ99835 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMOQ99835 AL590763.1-201ENST00000398297 1545 ntBASIC5.65□□□□□ -1.5
SMOQ99835 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SMOQ99835 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 SNORD65C-201ENST00000390962 71 ntBASIC5.65□□□□□ -1.5
SMOQ99835 LINC01347-201ENST00000417964 355 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC009518.2-201ENST00000418056 731 ntBASIC5.65□□□□□ -1.5
SMOQ99835 MTND2P18-201ENST00000419962 1030 ntBASIC5.65□□□□□ -1.5
SMOQ99835 USP9YP11-201ENST00000427537 717 ntBASIC5.65□□□□□ -1.5
SMOQ99835 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.65□□□□□ -1.5
SMOQ99835 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.65□□□□□ -1.5
SMOQ99835 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.65□□□□□ -1.5
SMOQ99835 EEF1A1P39-201ENST00000440791 250 ntBASIC5.65□□□□□ -1.5
SMOQ99835 CNOT7P2-201ENST00000441051 832 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AL163193.1-201ENST00000444895 788 ntBASIC5.65□□□□□ -1.5
SMOQ99835 MRPL35P2-201ENST00000448009 511 ntBASIC5.65□□□□□ -1.5
SMOQ99835 NPM1P19-201ENST00000450070 712 ntBASIC5.65□□□□□ -1.5
SMOQ99835 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.65□□□□□ -1.5
SMOQ99835 AC104634.1-201ENST00000452720 462 ntBASIC5.65□□□□□ -1.5
SMOQ99835 RN7SL799P-201ENST00000475891 298 ntBASIC5.65□□□□□ -1.5
SMOQ99835 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMOQ99835 RN7SL727P-201ENST00000482164 296 ntBASIC5.65□□□□□ -1.5
SMOQ99835 RN7SL30P-201ENST00000488416 306 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC072052.1-201ENST00000496556 306 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC008953.1-201ENST00000497334 318 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.65□□□□□ -1.5
SMOQ99835 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.65□□□□□ -1.5
SMOQ99835 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.65□□□□□ -1.5
SMOQ99835 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 RNA5SP92-201ENST00000516437 110 ntBASIC5.65□□□□□ -1.5
SMOQ99835 CDC42P3-201ENST00000518493 633 ntBASIC5.65□□□□□ -1.5
SMOQ99835 HIGD1AP18-201ENST00000520730 278 ntBASIC5.65□□□□□ -1.5
SMOQ99835 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.65□□□□□ -1.5
SMOQ99835 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.65□□□□□ -1.5
SMOQ99835 AC127381.1-201ENST00000555979 939 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.65□□□□□ -1.5
SMOQ99835 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.65□□□□□ -1.5
SMOQ99835 AC069307.1-201ENST00000602820 447 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AL358072.1-201ENST00000604156 575 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC018618.2-201ENST00000604770 446 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC011374.2-201ENST00000607135 526 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC007349.4-201ENST00000608114 532 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC245008.1-201ENST00000608123 476 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AC244107.2-201ENST00000611773 76 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AL138478.1-201ENST00000612252 832 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AL138960.1-201ENST00000613838 513 ntBASIC5.65□□□□□ -1.5
SMOQ99835 AP004607.9-201ENST00000618202 316 ntBASIC5.65□□□□□ -1.5
SMOQ99835 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.65□□□□□ -1.5
SMOQ99835 AC139792.2-201ENST00000624218 587 ntBASIC5.65□□□□□ -1.5
SMOQ99835 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.65□□□□□ -1.51
SMOQ99835 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.65□□□□□ -1.51
SMOQ99835 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMOQ99835 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.65□□□□□ -1.51
SMOQ99835 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SMOQ99835 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SMOQ99835 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SMOQ99835 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMOQ99835 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.65□□□□□ -1.51
SMOQ99835 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMOQ99835 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMOQ99835 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.65□□□□□ -1.51
SMOQ99835 AL133268.1-201ENST00000405676 1401 ntBASIC5.65□□□□□ -1.51
SMOQ99835 AL355834.1-201ENST00000556602 3965 ntBASIC5.65□□□□□ -1.51
SMOQ99835 BCORP1-203ENST00000513194 5093 ntBASIC5.65□□□□□ -1.51
SMOQ99835 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.64□□□□□ -1.51
SMOQ99835 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.64□□□□□ -1.51
SMOQ99835 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.64□□□□□ -1.51
SMOQ99835 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 AC017079.1-201ENST00000333650 415 ntBASIC5.64□□□□□ -1.51
SMOQ99835 ANKRD36P1-201ENST00000344424 659 ntBASIC5.64□□□□□ -1.51
SMOQ99835 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SMOQ99835 RNU6-1214P-201ENST00000363650 109 ntBASIC5.64□□□□□ -1.51
SMOQ99835 Y_RNA.169-201ENST00000363745 96 ntBASIC5.64□□□□□ -1.51
SMOQ99835 RNU4-51P-201ENST00000364206 140 ntBASIC5.64□□□□□ -1.51
SMOQ99835 SNORA67-201ENST00000384423 137 ntBASIC5.64□□□□□ -1.51
SMOQ99835 MT-TP-201ENST00000387461 68 ntBASIC5.64□□□□□ -1.51
SMOQ99835 HMGB3P31-201ENST00000413333 595 ntBASIC5.64□□□□□ -1.51
SMOQ99835 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 BTF3P8-201ENST00000414577 526 ntBASIC5.64□□□□□ -1.51
SMOQ99835 RPS7P9-201ENST00000414704 586 ntBASIC5.64□□□□□ -1.51
SMOQ99835 DPPA2P2-201ENST00000418220 897 ntBASIC5.64□□□□□ -1.51
SMOQ99835 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.64□□□□□ -1.51
SMOQ99835 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 AL359265.1-201ENST00000440296 795 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms