Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RNA5SP345-201ENST00000410646 108 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 OR51A6P-201ENST00000418680 1004 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 RPS26P13-201ENST00000419030 330 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 NPM1P26-201ENST00000426339 738 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC073052.1-201ENST00000440417 714 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC000111.2-201ENST00000448200 210 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 CCRL1P1-201ENST00000449542 1053 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 RPL31P20-201ENST00000449593 360 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC093166.2-201ENST00000455969 1017 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 BTF3P13-201ENST00000513224 490 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC021006.3-201ENST00000530771 192 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 OR1F2P-201ENST00000570470 933 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC087283.1-201ENST00000604029 1074 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 AL008729.2-201ENST00000606393 473 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC105105.5-201ENST00000622635 1294 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 AC097461.1-201ENST00000568928 2821 ntBASIC4.87□□□□□ -1.63
VPS35Q96QK1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VPS35Q96QK1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS35Q96QK1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC008758.3-201ENST00000507003 1829 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 MIR550A3-201ENST00000390735 95 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 GLUD1P9-201ENST00000420997 1173 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC093084.1-201ENST00000424233 687 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC007559.1-201ENST00000428736 355 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 RAD1P2-201ENST00000446414 663 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 RPL31P44-201ENST00000447680 377 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC022795.1-201ENST00000473808 480 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 OR9N1P-201ENST00000491296 333 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC231760.1-201ENST00000498002 260 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 OR52A4P-203ENST00000498233 1014 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 ARL4AP1-201ENST00000503220 705 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 RPS27AP18-201ENST00000515536 459 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 RNU6-551P-201ENST00000516661 103 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 RNA5SP392-201ENST00000516905 112 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC026688.1-201ENST00000520639 1168 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 BGLT3-201ENST00000564523 994 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC020910.3-201ENST00000603701 874 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC010424.2-201ENST00000607594 443 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC007620.3-201ENST00000608131 497 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC087385.3-201ENST00000620477 187 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AP001005.3-201ENST00000622049 129 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 AC073869.10-201ENST00000642016 354 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AL022393.1-201ENST00000625142 1677 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS35Q96QK1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS35Q96QK1 AL672167.1-204ENST00000641875 3017 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 LINC01109-201ENST00000603837 3081 ntBASIC4.86□□□□□ -1.63
VPS35Q96QK1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.85□□□□□ -1.63
VPS35Q96QK1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms