Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC104985.2-201ENST00000620598 500 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC073055.1-201ENST00000456901 1621 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AL391994.1-201ENST00000254724 282 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 RPS3AP2-201ENST00000407190 754 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 RNU2-66P-201ENST00000410650 161 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 RN7SKP293-201ENST00000411389 296 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 FNDC3CP-201ENST00000420795 1155 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC092170.1-201ENST00000440211 356 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC114755.5-201ENST00000447760 831 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AL445466.1-201ENST00000448432 357 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 FAR2P1-206ENST00000449736 709 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 GEMIN2P1-201ENST00000454246 752 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 SEPT7P3-201ENST00000455017 621 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AL122020.1-201ENST00000472287 459 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC116337.2-201ENST00000477662 156 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC008837.2-201ENST00000513076 418 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 WBP1LP3-201ENST00000523033 208 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 SMARCE1P4-201ENST00000523647 241 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 RPA2P3-201ENST00000533268 770 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC069545.1-201ENST00000605671 358 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AL352984.2-201ENST00000611153 546 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC063943.3-201ENST00000615562 356 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 AC110716.2-201ENST00000563865 3945 ntBASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNGAP1Q96PV0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 MAPK10-261ENST00000641050 3109 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 CASC19-206ENST00000641028 1430 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 RNU4-21P-201ENST00000362802 126 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 RNU6-560P-201ENST00000364007 108 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 RPL37P18-201ENST00000411602 243 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 SDHDP6-201ENST00000414693 480 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 FO393419.3-201ENST00000428741 282 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 AC091862.1-201ENST00000438016 1100 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 SNRPEP8-201ENST00000442866 260 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 AP000281.1-201ENST00000444036 316 ntBASIC6.94□□□□□ -1.3
SYNGAP1Q96PV0 ZNF619P1-201ENST00000446539 752 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms