Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 RNU5F-7P-201ENST00000363696 115 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 Y_RNA.193-201ENST00000363979 102 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 RNU6-474P-201ENST00000384243 107 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 RNU6-297P-201ENST00000384636 107 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 MIR568-201ENST00000385036 95 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 RNA5SP474-201ENST00000391234 90 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC007066.1-201ENST00000392902 381 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 Z97832.1-201ENST00000402490 328 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 GCNT1P4-201ENST00000404096 329 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 RPS26P38-201ENST00000414476 348 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC007394.1-201ENST00000421941 531 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 RPL12P16-201ENST00000431098 498 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 MTCO1P45-201ENST00000431457 267 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC091390.2-201ENST00000432573 374 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 FAR2P1-206ENST00000449736 709 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 SNORD42A-201ENST00000459584 64 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 EIF3LP3-201ENST00000495197 822 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 SUMO2P7-201ENST00000511179 285 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC010486.1-201ENST00000511793 424 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 RNU6-277P-201ENST00000516272 106 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AL512360.1-201ENST00000555346 234 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 DPPA3P2-202ENST00000557188 1219 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC023968.1-201ENST00000560719 475 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 GLYATL1P2-202ENST00000588046 902 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AL355472.4-201ENST00000610233 626 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AL590763.1-201ENST00000398297 1545 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 RNU6-660P-201ENST00000364566 109 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 U3.52-201ENST00000384034 216 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 MIR188-201ENST00000385034 86 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 OR7E101P-201ENST00000400428 513 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 DUTP4-201ENST00000424782 475 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AL022238.1-201ENST00000442557 355 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 RPS24P6-201ENST00000452670 400 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 NDUFA5P7-201ENST00000452914 242 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 MTCO2P29-201ENST00000465212 189 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 RPS4XP15-201ENST00000489210 795 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 HSPA8P13-201ENST00000523715 472 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC026956.1-201ENST00000558741 396 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC243960.4-201ENST00000600532 288 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AL139286.1-201ENST00000604465 483 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AC016925.2-201ENST00000605108 242 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.78□□□□□ -1.16
TRIM47Q96LD4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM47Q96LD4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms