Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIMC1Q8NDZ2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SIMC1Q8NDZ2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIMC1Q8NDZ2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.53□□□□□ -1.52
SIMC1Q8NDZ2 AC012254.3-201ENST00000591183 2117 ntBASIC5.53□□□□□ -1.52
SIMC1Q8NDZ2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RNA5SP477-201ENST00000362639 119 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 Y_RNA.51-201ENST00000362725 102 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RNU1-146P-201ENST00000364015 165 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RNU6-636P-201ENST00000384598 107 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL031985.1-201ENST00000392713 418 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 ATF1P1-201ENST00000406040 927 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 LINC01881-201ENST00000416103 412 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RPS4XP5-201ENST00000419038 768 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC099677.3-201ENST00000427081 395 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 BX323845.3-201ENST00000428215 527 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 NPM1P18-201ENST00000434232 732 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC090018.1-201ENST00000434369 367 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 CLUHP1-201ENST00000435012 1190 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL603882.1-201ENST00000463059 681 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RPL23AP12-201ENST00000467573 473 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL157777.1-201ENST00000468100 304 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RN7SL177P-201ENST00000476596 299 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RPS12P31-201ENST00000491419 398 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC091860.1-201ENST00000505723 432 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RNA5SP438-201ENST00000516561 112 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 HMGB1P1-201ENST00000522557 636 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RFPL1S-203ENST00000539579 330 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL391156.1-201ENST00000554965 554 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL359219.2-201ENST00000555184 348 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 RPA2P1-201ENST00000556557 721 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 GARSP1-201ENST00000570895 719 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC012213.3-201ENST00000577199 777 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC245297.2-201ENST00000610119 565 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 VIS1.1-201ENST00000610517 203 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 MIR7973-1-201ENST00000614683 76 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC006338.2-201ENST00000616864 791 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 uc_338.9-201ENST00000617424 182 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AP000526.1-201ENST00000603308 1388 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC025263.3-201ENST00000622965 1396 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 AC002525.1-201ENST00000624392 1622 ntBASIC5.52□□□□□ -1.53
SIMC1Q8NDZ2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 PWAR1-201ENST00000624188 2414 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 AL603865.2-201ENST00000401679 213 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 LYPLA1P3-201ENST00000402650 695 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 RNA5SP178-201ENST00000410380 128 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 AC048351.1-201ENST00000420064 602 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 AC066692.1-201ENST00000421721 457 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SIMC1Q8NDZ2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms