Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL596275.2-206ENST00000641957 626 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC131971.1-201ENST00000332881 1482 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 RNU1-82P-201ENST00000390851 165 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AL512430.2-201ENST00000406786 339 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 GLUD1P9-201ENST00000420997 1173 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 OR2B7P-201ENST00000429302 934 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 VN1R54P-201ENST00000435210 1049 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 SNRPFP2-201ENST00000440710 251 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC113430.1-201ENST00000506872 718 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC091868.1-201ENST00000508746 304 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 BTG4P1-201ENST00000510421 183 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 RFPL4AP3-201ENST00000515267 345 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 NPM1P45-201ENST00000583151 559 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC005084.1-201ENST00000605160 304 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AC015871.5-202ENST00000623252 701 ntBASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC65Q8IXS2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AL442639.1-201ENST00000625030 1899 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 UBBP2-201ENST00000376781 231 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AL590762.2-201ENST00000395798 571 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AL080315.1-201ENST00000406055 466 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 EIF4A1P1-201ENST00000420241 934 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 RPL7P57-201ENST00000423238 740 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AC104651.2-201ENST00000447549 528 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 RPL31P44-201ENST00000447680 377 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 SCARNA22-201ENST00000503991 125 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AC112184.1-201ENST00000505179 312 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 DYNLL1P4-201ENST00000549314 266 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 PCNPP1-201ENST00000552501 511 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AC122134.1-201ENST00000565664 1104 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 AL137246.1-201ENST00000607072 977 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 CASC19-222ENST00000641321 1173 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 SALL4P2-201ENST00000423288 2910 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC65Q8IXS2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 RNU1-83P-201ENST00000363426 164 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 RNA5SP113-201ENST00000410486 84 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 FABP7P2-201ENST00000429946 379 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 NRBF2P3-201ENST00000432731 865 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 RPS26P2-201ENST00000440331 348 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 HIGD1AP8-201ENST00000453927 274 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AC063943.1-201ENST00000465434 453 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AC112206.1-201ENST00000468416 477 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms