Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 OR10AB1P-202ENST00000641219 1686 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 CUL4AP1-201ENST00000514750 1863 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC027514.1-201ENST00000588561 1603 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 RNU6-1331P-201ENST00000363658 106 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 RNU6-553P-201ENST00000364047 96 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 OR5H15-201ENST00000383696 930 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 MTCO1P56-201ENST00000401674 224 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 RN7SKP17-201ENST00000411242 351 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 OR6E1P-201ENST00000414424 923 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 BMS1P17-202ENST00000416720 316 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 OR10T1P-201ENST00000424327 947 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC104843.2-201ENST00000427666 297 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC124944.2-201ENST00000429866 1242 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC129850.1-201ENST00000436203 508 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC002504.1-201ENST00000438281 691 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL353572.1-201ENST00000442490 417 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 RPS27P5-201ENST00000444247 244 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL161636.2-201ENST00000445179 927 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 VDAC2P4-201ENST00000452925 711 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 MRPL42P4-201ENST00000453267 443 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 RPS7P7-201ENST00000463499 571 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 BZW1P2-201ENST00000473537 826 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 PPIAP19-201ENST00000486414 492 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 RPS27AP16-201ENST00000492222 470 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC027544.3-201ENST00000535082 757 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 IGBP1P1-201ENST00000554337 1009 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC021483.2-201ENST00000567415 758 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC090616.2-202ENST00000584248 222 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AP003392.5-201ENST00000607857 415 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC087241.4-201ENST00000612441 480 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC007204.2-201ENST00000615022 616 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC015712.7-201ENST00000615211 635 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL158062.1-201ENST00000619632 745 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC091931.1-201ENST00000623488 728 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK3Q8IV63 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC144833.1-201ENST00000567953 4089 ntBASIC5.48□□□□□ -1.53
VRK3Q8IV63 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VRK3Q8IV63 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 MTND5P24-201ENST00000438892 1767 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC015799.1-201ENST00000622996 3122 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC093671.1-201ENST00000624981 2929 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms