Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 OR4F13P-201ENST00000428478 931 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC007365.2-201ENST00000428806 458 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 NPM1P34-201ENST00000428821 893 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 GAPDHP37-201ENST00000442317 968 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC079448.1-201ENST00000449377 373 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 RN7SL390P-201ENST00000470634 284 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC112484.3-201ENST00000505910 329 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 snoU109.5-201ENST00000516231 132 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC026458.1-201ENST00000564330 438 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 MIR4795-201ENST00000584182 89 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC010928.3-201ENST00000587712 541 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 BNIP3P10-201ENST00000605360 577 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC097468.3-201ENST00000607956 456 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 MIR6721-201ENST00000617181 87 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 OR4G11P-202ENST00000642116 1414 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
RNF135Q8IUD6 UGT2B27P-201ENST00000505092 1620 ntBASIC7.34□□□□□ -1.24
RNF135Q8IUD6 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
RNF135Q8IUD6 AC006378.2-201ENST00000623178 2476 ntBASIC7.34□□□□□ -1.24
RNF135Q8IUD6 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 UGT2B25P-201ENST00000511504 1586 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC079949.2-201ENST00000617117 2933 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RNU1-55P-201ENST00000365510 158 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RNA5SP279-201ENST00000365513 117 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 SNORA51.12-201ENST00000384448 134 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RNU6-1055P-201ENST00000391085 107 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RPL24P7-201ENST00000399435 453 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 PEX12P1-201ENST00000400284 1048 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AL136131.1-201ENST00000406079 803 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 PIGFP2-201ENST00000421400 651 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CHCHD3P1-201ENST00000425516 676 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC092106.2-201ENST00000436597 487 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 POU5F1P5-201ENST00000445059 658 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RPL7AP71-201ENST00000451120 739 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RBMY2TP-201ENST00000451162 947 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 MEMO1P3-201ENST00000459811 302 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC005017.1-201ENST00000482002 490 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RPL35P6-201ENST00000490024 372 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC113367.2-201ENST00000505749 160 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AP003467.2-201ENST00000520175 319 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms