Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC092079.1-201ENST00000558620 1985 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.53□□□□□ -1.69
NIPAL3Q6P499 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 RN7SKP273-201ENST00000411392 314 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 BX510359.3-201ENST00000422168 306 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 RPS26P4-201ENST00000431743 355 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 EEF1B2P5-201ENST00000444820 548 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC005532.2-201ENST00000467154 373 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC097484.1-201ENST00000471148 389 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 RN7SL177P-201ENST00000476596 299 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC020890.1-201ENST00000491837 504 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC008953.1-201ENST00000497334 318 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC108157.1-201ENST00000510511 539 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 RNU6-1308P-201ENST00000516817 103 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 HIGD1AP18-201ENST00000520730 278 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC092490.3-201ENST00000545370 572 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC068714.1-201ENST00000559623 800 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 CYCSP40-201ENST00000575927 294 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AL133247.2-201ENST00000603236 482 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 BX322635.1-201ENST00000605804 496 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC009163.6-201ENST00000612367 342 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 MIR8069-1-201ENST00000616627 86 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 MIR8069-2-201ENST00000621412 86 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AP003497.2-201ENST00000624220 967 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AP000756.2-201ENST00000624168 2567 ntBASIC4.52□□□□□ -1.69
NIPAL3Q6P499 AC007382.1-201ENST00000624376 2618 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 RNU6-666P-201ENST00000363499 107 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 SNORA27.3-201ENST00000364937 134 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 LRRC37BP1-201ENST00000398851 714 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 SETP15-201ENST00000412724 337 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 RPL6P29-201ENST00000414863 865 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC099336.2-201ENST00000422457 254 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 BX323845.1-201ENST00000432417 179 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AL450023.3-201ENST00000440592 271 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC099560.2-201ENST00000457554 255 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 RPS17P2-201ENST00000461663 408 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 RN7SL799P-201ENST00000475891 298 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 METTL15P1-201ENST00000481421 1045 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC090686.1-201ENST00000481577 749 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC010350.1-201ENST00000504908 231 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC073358.1-201ENST00000505671 684 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC147055.3-201ENST00000510547 851 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC093770.1-201ENST00000511559 571 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 RN7SKP66-201ENST00000516681 231 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 RNU6-889P-201ENST00000517189 103 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 OR10D4P-201ENST00000525892 951 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AL390334.1-201ENST00000556395 450 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC012414.2-201ENST00000559474 187 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AC011447.4-201ENST00000587562 111 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 AL391834.1-201ENST00000609609 560 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 SDR42E1P1-201ENST00000611327 477 ntBASIC4.51□□□□□ -1.69
NIPAL3Q6P499 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms