Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SCAND3P1-201ENST00000439854 1060 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 CEACAMP9-201ENST00000442990 513 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AL691482.1-201ENST00000453255 87 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AL591473.1-201ENST00000464297 313 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 RN7SL809P-201ENST00000482040 297 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC116562.1-201ENST00000485355 781 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC113398.2-201ENST00000507630 558 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 RNA5SP228-201ENST00000516232 133 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC104687.2-201ENST00000604442 342 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC015871.5-202ENST00000623252 701 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC243960.7-201ENST00000623532 707 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.53□□□□□ -1.69
H3F3CQ6NXT2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 RNA5SP191-201ENST00000362585 102 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 SNORA56-201ENST00000383966 129 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 MIR192-201ENST00000384915 110 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 NCSTNP1-201ENST00000406229 144 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 RN7SKP216-201ENST00000411050 312 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 RPL26P29-201ENST00000415623 438 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC004074.1-201ENST00000421810 1063 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC245028.1-201ENST00000423259 256 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 MTND4LP13-201ENST00000425022 298 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AL359265.2-201ENST00000434367 631 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC011753.3-201ENST00000443436 406 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 RPL36AP15-201ENST00000444514 266 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC000111.2-201ENST00000448200 210 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 OR1H1P-201ENST00000448731 937 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC243772.1-201ENST00000451620 410 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 RPS5P7-201ENST00000456664 608 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 RPS29P33-201ENST00000456717 146 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 HMGB1P19-201ENST00000517578 577 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC100784.1-201ENST00000522790 310 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC068790.7-201ENST00000602347 528 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 GMCL1P2-201ENST00000605230 823 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 AC019206.1-201ENST00000621938 425 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 SMG1P6-201ENST00000532337 2930 ntBASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3CQ6NXT2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 NCLP2-201ENST00000416078 1462 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 SNORA73.1-201ENST00000363107 205 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 RN7SKP224-201ENST00000364140 325 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 RPS4XP9-201ENST00000405151 780 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 RNU2-50P-201ENST00000410494 143 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 TBCAP2-201ENST00000416175 326 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 BX510359.2-201ENST00000417920 305 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AC104333.2-201ENST00000422630 192 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 OR2AH1P-201ENST00000425717 928 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AC092447.2-201ENST00000435487 669 ntBASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3CQ6NXT2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms