Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CASC19-243ENST00000641588 1546 ntBASIC4.05□□□□□ -1.76
LRRK2Q5S007 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRRK2Q5S007 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LRRK2Q5S007 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
LRRK2Q5S007 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRK2Q5S007 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.05□□□□□ -1.76
LRRK2Q5S007 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LRRK2Q5S007 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRK2Q5S007 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRK2Q5S007 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LRRK2Q5S007 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRK2Q5S007 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.05□□□□□ -1.76
LRRK2Q5S007 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRK2Q5S007 RNA5SP283-201ENST00000365604 119 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 MIR200C-201ENST00000384980 68 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 HSFY1P1-201ENST00000423928 1178 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 AC022133.1-201ENST00000490961 571 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 PAICSP4-201ENST00000517543 1253 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AP001804.2-201ENST00000533932 910 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 AP000866.6-201ENST00000638898 3579 ntBASIC4.04□□□□□ -1.76
LRRK2Q5S007 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.04□□□□□ -1.76
LRRK2Q5S007 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRRK2Q5S007 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 U3.32-201ENST00000408116 212 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AC236972.1-201ENST00000433225 199 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL390879.1-201ENST00000439143 386 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL451086.1-201ENST00000605596 223 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AC140479.2-201ENST00000421567 3130 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AC021146.4-201ENST00000309229 279 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 RNU6-1279P-201ENST00000383917 103 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 TBCAP2-201ENST00000416175 326 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 MTND4LP2-201ENST00000502312 285 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AP001160.4-201ENST00000596971 382 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL683813.2-201ENST00000605245 502 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 AL022401.1-201ENST00000619498 108 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 AC140479.6-201ENST00000633535 357 ntBASIC4.03□□□□□ -1.76
LRRK2Q5S007 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRRK2Q5S007 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.03□□□□□ -1.76
LRRK2Q5S007 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.03□□□□□ -1.77
LRRK2Q5S007 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.03□□□□□ -1.77
LRRK2Q5S007 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.03□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms