Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 TOMM22P4-201ENST00000511318 336 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC068993.1-201ENST00000546724 589 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AL109741.3-201ENST00000561748 592 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AL049844.2-201ENST00000604280 628 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AL118522.2-201ENST00000616045 615 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC104985.3-201ENST00000623479 597 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC139713.2-210ENST00000641741 992 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 CDC27P2-201ENST00000425026 1922 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SLC44A4Q53GD3 MT-RNR2-201ENST00000387347 1559 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC020656.2-201ENST00000613291 5309 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNA5SP305-201ENST00000362665 119 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNA5SP335-201ENST00000363817 110 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RN7SKP6-201ENST00000364795 319 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNU6-906P-201ENST00000384700 70 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNY3P9-201ENST00000384727 106 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNU6-1320P-201ENST00000390838 107 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNU6-1269P-201ENST00000391139 107 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 HMGB3P18-201ENST00000406327 590 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RPS6P23-201ENST00000413224 722 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 DPY19L1P2-201ENST00000426647 915 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 HSFY3P-201ENST00000444242 1191 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNU6-599P-201ENST00000459383 107 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNU6-1193P-201ENST00000459461 107 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RPS23P2-201ENST00000463671 415 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 METTL15P1-201ENST00000481421 1045 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC112673.1-201ENST00000513168 575 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 MIR4436B2-201ENST00000581415 91 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 MIR4436B1-201ENST00000583272 91 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 BNIP3P24-201ENST00000593398 557 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 MIR6820-201ENST00000611508 62 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC009163.6-201ENST00000612367 342 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 PART1_2.1-201ENST00000612397 250 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AL035461.2-201ENST00000619201 524 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNU6-368P-201ENST00000620928 107 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 RNU6-538P-201ENST00000622329 107 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AP001784.1-201ENST00000624107 428 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AC119674.1-212ENST00000641155 993 ntBASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms