Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SSBP1Q04837 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP1Q04837 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.81□□□□□ -1.8
SSBP1Q04837 AC115283.1-201ENST00000427353 400 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.81□□□□□ -1.8
SSBP1Q04837 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.81□□□□□ -1.8
SSBP1Q04837 AC108463.1-201ENST00000450258 347 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP1Q04837 SCARNA10-201ENST00000459255 330 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 RPL36AP41-201ENST00000493820 306 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.81□□□□□ -1.8
SSBP1Q04837 SCARNA22-201ENST00000503991 125 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 AC024558.1-201ENST00000505008 528 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.81□□□□□ -1.8
SSBP1Q04837 AC092490.3-201ENST00000545370 572 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP1Q04837 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP1Q04837 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.81□□□□□ -1.8
SSBP1Q04837 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC3.81□□□□□ -1.8
SSBP1Q04837 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP1Q04837 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP1Q04837 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP1Q04837 AC093799.2-201ENST00000610062 578 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 AL121873.1-201ENST00000616013 524 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 AP002505.2-201ENST00000623585 696 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 AC008785.1-201ENST00000624475 456 ntBASIC3.81□□□□□ -1.8
SSBP1Q04837 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SSBP1Q04837 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP1Q04837 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP1Q04837 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP1Q04837 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP1Q04837 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP1Q04837 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP1Q04837 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSBP1Q04837 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP1Q04837 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP1Q04837 SUMO2P8-201ENST00000434672 286 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 AC097523.2-201ENST00000435551 652 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP1Q04837 AC073109.1-201ENST00000445066 978 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP1Q04837 AC092349.1-201ENST00000504903 310 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 GAPDHP56-201ENST00000506031 988 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP1Q04837 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP1Q04837 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP1Q04837 FKBP1AP1-201ENST00000594588 318 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP1Q04837 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.8□□□□□ -1.8
SSBP1Q04837 Z98200.1-201ENST00000607298 470 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP1Q04837 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP1Q04837 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SSBP1Q04837 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP1Q04837 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP1Q04837 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP1Q04837 CPHL1P-201ENST00000461341 3407 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP1Q04837 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSBP1Q04837 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 KARSP3-201ENST00000571212 1504 ntBASIC3.8□□□□□ -1.8
SSBP1Q04837 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP1Q04837 MAPK10-263ENST00000641052 4307 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.79□□□□□ -1.8
SSBP1Q04837 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP1Q04837 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
SSBP1Q04837 OR52B1P-201ENST00000316506 909 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 TMSB4XP4-201ENST00000323496 618 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSBP1Q04837 VN1R3-201ENST00000418822 919 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC140479.3-201ENST00000418944 1126 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP1Q04837 CYCSP11-201ENST00000436426 315 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP1Q04837 HMGN1P2-201ENST00000445197 310 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.79□□□□□ -1.8
SSBP1Q04837 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.79□□□□□ -1.8
SSBP1Q04837 CCDC75P1-201ENST00000469247 791 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC104763.1-201ENST00000475274 360 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP1Q04837 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP1Q04837 AC090281.1-201ENST00000523019 276 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP1Q04837 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.79□□□□□ -1.8
SSBP1Q04837 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.79□□□□□ -1.8
SSBP1Q04837 RN7SL652P-201ENST00000577769 300 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC005034.4-201ENST00000603612 899 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC079395.2-201ENST00000610982 737 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC015922.4-201ENST00000612568 690 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 MIR6071-201ENST00000616741 78 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC126175.1-201ENST00000617041 758 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AL353684.1-201ENST00000622677 1120 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP1Q04837 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP1Q04837 AC018555.1-201ENST00000567548 1980 ntBASIC3.79□□□□□ -1.8
SSBP1Q04837 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SSBP1Q04837 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSBP1Q04837 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SSBP1Q04837 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms