Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IGKV2-4-201ENST00000523070 340 ntBASIC3.58□□□□□ -1.84
CCL20P78556 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.58□□□□□ -1.84
CCL20P78556 OR5M7P-201ENST00000526140 972 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 MIR5699-201ENST00000578903 90 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 AC090181.2-201ENST00000602975 672 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC073137.1-201ENST00000605636 634 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC007497.1-201ENST00000610421 561 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AL359513.1-201ENST00000614364 557 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC026368.1-201ENST00000614934 690 ntBASIC3.58□□□□□ -1.84
CCL20P78556 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL20P78556 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.58□□□□□ -1.84
CCL20P78556 AC011493.1-201ENST00000596753 1632 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AL391684.1-202ENST00000641293 1636 ntBASIC3.58□□□□□ -1.84
CCL20P78556 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 NXPH1-205ENST00000602349 1953 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC027279.1-201ENST00000568885 4284 ntBASIC3.58□□□□□ -1.84
CCL20P78556 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 ZFRP1-201ENST00000457579 2970 ntBASIC3.57□□□□□ -1.84
CCL20P78556 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCL20P78556 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCL20P78556 OR52B1P-201ENST00000316506 909 ntBASIC3.57□□□□□ -1.84
CCL20P78556 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCL20P78556 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 RN7SKP115-201ENST00000363177 317 ntBASIC3.57□□□□□ -1.84
CCL20P78556 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCL20P78556 ATP5F1P2-201ENST00000398143 760 ntBASIC3.57□□□□□ -1.84
CCL20P78556 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCL20P78556 SNORA81-201ENST00000408493 178 ntBASIC3.57□□□□□ -1.84
CCL20P78556 RN7SKP126-201ENST00000411143 300 ntBASIC3.57□□□□□ -1.84
CCL20P78556 RPS23P10-201ENST00000416185 486 ntBASIC3.57□□□□□ -1.84
CCL20P78556 BMS1P13-201ENST00000417301 885 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AL590609.2-201ENST00000421430 368 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.57□□□□□ -1.84
CCL20P78556 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 MTND6P18-201ENST00000439477 513 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AL163193.1-201ENST00000444895 788 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AL121877.1-201ENST00000453704 622 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.57□□□□□ -1.84
CCL20P78556 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCL20P78556 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.57□□□□□ -1.84
CCL20P78556 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCL20P78556 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 UBTFL9-201ENST00000534504 1148 ntBASIC3.57□□□□□ -1.84
CCL20P78556 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.57□□□□□ -1.84
CCL20P78556 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 RN7SL802P-201ENST00000577858 299 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC3.57□□□□□ -1.84
CCL20P78556 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.57□□□□□ -1.84
CCL20P78556 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 AC023762.1-201ENST00000603280 584 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC095055.1-201ENST00000603472 1113 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC011453.2-201ENST00000603737 729 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC133552.5-201ENST00000604266 540 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC087468.1-201ENST00000604365 630 ntBASIC3.57□□□□□ -1.84
CCL20P78556 MIR432-201ENST00000606207 94 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC023813.4-201ENST00000607580 580 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AL135786.2-201ENST00000608422 615 ntBASIC3.57□□□□□ -1.84
CCL20P78556 MIR6774-201ENST00000614651 70 ntBASIC3.57□□□□□ -1.84
CCL20P78556 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 AL591926.1-201ENST00000620542 217 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AL512356.3-201ENST00000623005 461 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC073592.6-201ENST00000624271 415 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC090181.3-201ENST00000624777 1514 ntBASIC3.57□□□□□ -1.84
CCL20P78556 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
CCL20P78556 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCL20P78556 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCL20P78556 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCL20P78556 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CCL20P78556 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 THAP12P8-201ENST00000447914 2115 ntBASIC3.56□□□□□ -1.84
CCL20P78556 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms