Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CL1P78423 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 AC006042.3-201ENST00000454684 1469 ntBASIC4.37□□□□□ -1.71
CX3CL1P78423 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CL1P78423 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
CX3CL1P78423 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 AC019072.1-201ENST00000604535 1551 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CL1P78423 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CL1P78423 OR13Z1P-201ENST00000416141 834 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CL1P78423 RPL12P11-201ENST00000439970 501 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AC019185.1-201ENST00000442718 389 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC012512.1-201ENST00000446594 718 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CL1P78423 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CL1P78423 OR52E3P-201ENST00000452083 936 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AC010460.2-201ENST00000509054 677 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 HPRT1P1-201ENST00000509498 657 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC147055.3-201ENST00000510547 851 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 RN7SKP99-201ENST00000517028 307 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AC091163.3-201ENST00000518269 1144 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC079064.1-201ENST00000528365 362 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CL1P78423 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AC095057.3-201ENST00000567102 1157 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC015720.2-201ENST00000567709 334 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AP005403.1-201ENST00000579720 229 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC127024.5-201ENST00000580085 462 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 MIR1273E-201ENST00000581165 102 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CL1P78423 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 RPAP2P1-201ENST00000603626 1168 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 RNA5SP440-201ENST00000612665 119 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AL118522.2-201ENST00000616045 615 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 CYCSP41-201ENST00000616920 296 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 AL691477.1-201ENST00000624398 162 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CL1P78423 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CL1P78423 SAMMSON-227ENST00000642114 1199 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CL1P78423 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CL1P78423 ADAM5-202ENST00000399789 1942 ntBASIC4.36□□□□□ -1.71
CX3CL1P78423 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CL1P78423 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 AC104623.2-202ENST00000623477 4002 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 BRAFP1-201ENST00000445336 2703 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CX3CL1P78423 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 SNORD56.6-201ENST00000384569 71 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 MIR1303-201ENST00000408625 86 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 AC092745.2-202ENST00000411880 369 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 CTSL3P-202ENST00000412179 788 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 Z93019.1-201ENST00000416450 973 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 USP9YP21-201ENST00000420603 432 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 MTCYBP32-201ENST00000427945 1084 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 CDY14P-201ENST00000431260 1014 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 RPS24P8-201ENST00000431490 402 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 NDUFB4P8-201ENST00000435351 367 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CL1P78423 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CL1P78423 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.35□□□□□ -1.71
CX3CL1P78423 CBX1P4-201ENST00000439415 457 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 CDY12P-201ENST00000440679 1015 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 FHP1-201ENST00000442741 703 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 AP000281.1-201ENST00000444036 316 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 CDY13P-201ENST00000445813 1015 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms