Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.14□□□□□ -1.59
RAE1P78406 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.14□□□□□ -1.59
RAE1P78406 AC091057.2-201ENST00000602594 792 ntBASIC5.14□□□□□ -1.59
RAE1P78406 MTND3P19-201ENST00000603825 345 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC016877.3-201ENST00000606778 504 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC009237.15-201ENST00000610252 501 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC108359.1-201ENST00000616451 1211 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC007342.8-201ENST00000623278 678 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AP003400.3-201ENST00000624904 346 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RAE1P78406 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RAE1P78406 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 AL360270.2-201ENST00000562952 5985 ntBASIC5.13□□□□□ -1.59
RAE1P78406 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.13□□□□□ -1.59
RAE1P78406 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
RAE1P78406 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 AC007996.1-201ENST00000620414 2821 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 RNA5SP234-201ENST00000363916 119 ntBASIC5.13□□□□□ -1.59
RAE1P78406 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 ELOCP9-201ENST00000418624 239 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 TNPO1P1-201ENST00000423641 1138 ntBASIC5.13□□□□□ -1.59
RAE1P78406 HIGD1AP12-201ENST00000427832 281 ntBASIC5.13□□□□□ -1.59
RAE1P78406 HSPD1P12-201ENST00000429127 1069 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AL136231.1-201ENST00000429407 730 ntBASIC5.13□□□□□ -1.59
RAE1P78406 YWHAEP5-201ENST00000431545 765 ntBASIC5.13□□□□□ -1.59
RAE1P78406 RPL12P17-201ENST00000432393 498 ntBASIC5.13□□□□□ -1.59
RAE1P78406 RPL19P16-201ENST00000433839 588 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 AC002542.1-201ENST00000440683 193 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 AC068135.1-201ENST00000446164 246 ntBASIC5.13□□□□□ -1.59
RAE1P78406 HMGN1P36-201ENST00000446623 298 ntBASIC5.13□□□□□ -1.59
RAE1P78406 Z99714.1-201ENST00000450463 807 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AL672138.1-201ENST00000450604 1015 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AP000797.2-201ENST00000475768 606 ntBASIC5.13□□□□□ -1.59
RAE1P78406 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 MTND2P14-201ENST00000482139 351 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AC091544.1-201ENST00000484702 348 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AC058823.1-201ENST00000485315 474 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.13□□□□□ -1.59
RAE1P78406 AC007834.2-201ENST00000536310 343 ntBASIC5.13□□□□□ -1.59
RAE1P78406 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 OSBPL9P5-201ENST00000542581 171 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 AC008083.2-201ENST00000546707 476 ntBASIC5.13□□□□□ -1.59
RAE1P78406 ZNF321P-202ENST00000550843 495 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.13□□□□□ -1.59
RAE1P78406 AC090695.1-201ENST00000561269 1222 ntBASIC5.13□□□□□ -1.59
RAE1P78406 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 CYP2C60P-201ENST00000566088 139 ntBASIC5.13□□□□□ -1.59
RAE1P78406 RN7SL356P-201ENST00000582228 248 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AC069366.1-201ENST00000583159 838 ntBASIC5.13□□□□□ -1.59
RAE1P78406 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.13□□□□□ -1.59
RAE1P78406 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 AC125494.3-201ENST00000602759 455 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AL445423.1-201ENST00000609941 536 ntBASIC5.13□□□□□ -1.59
RAE1P78406 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.13□□□□□ -1.59
RAE1P78406 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.13□□□□□ -1.59
RAE1P78406 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.13□□□□□ -1.59
RAE1P78406 AP003399.1-201ENST00000637534 361 ntBASIC5.13□□□□□ -1.59
RAE1P78406 LINC02211-204ENST00000642024 1070 ntBASIC5.13□□□□□ -1.59
RAE1P78406 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 SAMMSON-210ENST00000641260 1308 ntBASIC5.13□□□□□ -1.59
RAE1P78406 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.13□□□□□ -1.59
RAE1P78406 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.13□□□□□ -1.59
RAE1P78406 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAE1P78406 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.13□□□□□ -1.59
RAE1P78406 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RAE1P78406 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms