Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.35□□□□□ -1.55
VCPP55072 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.35□□□□□ -1.55
VCPP55072 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.35□□□□□ -1.55
VCPP55072 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.35□□□□□ -1.55
VCPP55072 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VCPP55072 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VCPP55072 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.34□□□□□ -1.55
VCPP55072 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VCPP55072 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.34□□□□□ -1.55
VCPP55072 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VCPP55072 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.34□□□□□ -1.55
VCPP55072 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VCPP55072 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.34□□□□□ -1.55
VCPP55072 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.34□□□□□ -1.55
VCPP55072 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VCPP55072 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VCPP55072 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.34□□□□□ -1.55
VCPP55072 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VCPP55072 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.34□□□□□ -1.55
VCPP55072 RNA5SP428-201ENST00000365129 132 ntBASIC5.34□□□□□ -1.55
VCPP55072 AL035079.1-201ENST00000405210 287 ntBASIC5.34□□□□□ -1.55
VCPP55072 RPL12P43-201ENST00000420608 499 ntBASIC5.34□□□□□ -1.55
VCPP55072 AC234779.1-201ENST00000425910 285 ntBASIC5.34□□□□□ -1.55
VCPP55072 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.34□□□□□ -1.55
VCPP55072 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.34□□□□□ -1.55
VCPP55072 AC005412.2-201ENST00000492004 341 ntBASIC5.34□□□□□ -1.55
VCPP55072 AC083829.1-201ENST00000503756 657 ntBASIC5.34□□□□□ -1.55
VCPP55072 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.34□□□□□ -1.55
VCPP55072 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.34□□□□□ -1.55
VCPP55072 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.34□□□□□ -1.55
VCPP55072 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.34□□□□□ -1.55
VCPP55072 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.34□□□□□ -1.55
VCPP55072 BNIP3P35-201ENST00000604530 490 ntBASIC5.34□□□□□ -1.55
VCPP55072 AC092653.1-201ENST00000608509 531 ntBASIC5.34□□□□□ -1.55
VCPP55072 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VCPP55072 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.34□□□□□ -1.56
VCPP55072 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
VCPP55072 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 AC233968.1-201ENST00000611212 1300 ntBASIC5.33□□□□□ -1.56
VCPP55072 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.33□□□□□ -1.56
VCPP55072 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 NUDT19P3-201ENST00000404698 555 ntBASIC5.33□□□□□ -1.56
VCPP55072 SNORA11C-201ENST00000408532 129 ntBASIC5.33□□□□□ -1.56
VCPP55072 SETP15-201ENST00000412724 337 ntBASIC5.33□□□□□ -1.56
VCPP55072 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.33□□□□□ -1.56
VCPP55072 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.33□□□□□ -1.56
VCPP55072 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.33□□□□□ -1.56
VCPP55072 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.33□□□□□ -1.56
VCPP55072 AL157385.1-201ENST00000446973 268 ntBASIC5.33□□□□□ -1.56
VCPP55072 PPIAP21-201ENST00000464473 501 ntBASIC5.33□□□□□ -1.56
VCPP55072 AC020779.1-201ENST00000478757 796 ntBASIC5.33□□□□□ -1.56
VCPP55072 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.33□□□□□ -1.56
VCPP55072 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.33□□□□□ -1.56
VCPP55072 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.33□□□□□ -1.56
VCPP55072 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.33□□□□□ -1.56
VCPP55072 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.33□□□□□ -1.56
VCPP55072 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.33□□□□□ -1.56
VCPP55072 MIR3160-1-201ENST00000577972 85 ntBASIC5.33□□□□□ -1.56
VCPP55072 DPRXP4-201ENST00000578053 568 ntBASIC5.33□□□□□ -1.56
VCPP55072 MIR4472-2-201ENST00000582069 67 ntBASIC5.33□□□□□ -1.56
VCPP55072 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VCPP55072 AL391358.1-201ENST00000605342 190 ntBASIC5.33□□□□□ -1.56
VCPP55072 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.33□□□□□ -1.56
VCPP55072 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
VCPP55072 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
VCPP55072 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.33□□□□□ -1.56
VCPP55072 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.32□□□□□ -1.56
VCPP55072 AC063976.2-201ENST00000425667 3556 ntBASIC5.32□□□□□ -1.56
VCPP55072 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.32□□□□□ -1.56
VCPP55072 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 SMG1P4-204ENST00000523028 4131 ntBASIC5.32□□□□□ -1.56
VCPP55072 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 AC008079.2-201ENST00000623543 20396 ntBASIC5.32□□□□□ -1.56
VCPP55072 AL132640.2-201ENST00000559968 1698 ntBASIC5.32□□□□□ -1.56
VCPP55072 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
VCPP55072 RNA5SP191-201ENST00000362585 102 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms