Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MSH6P52701 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.52□□□□□ -1.37
MSH6P52701 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSH6P52701 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSH6P52701 AL672167.2-201ENST00000377164 879 ntBASIC6.52□□□□□ -1.37
MSH6P52701 TMSB10P2-201ENST00000416049 131 ntBASIC6.52□□□□□ -1.37
MSH6P52701 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.52□□□□□ -1.37
MSH6P52701 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.52□□□□□ -1.37
MSH6P52701 AC104763.1-201ENST00000475274 360 ntBASIC6.52□□□□□ -1.37
MSH6P52701 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.52□□□□□ -1.37
MSH6P52701 AC016559.2-201ENST00000510759 359 ntBASIC6.52□□□□□ -1.37
MSH6P52701 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.52□□□□□ -1.37
MSH6P52701 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.52□□□□□ -1.37
MSH6P52701 AC040958.1-201ENST00000561102 201 ntBASIC6.52□□□□□ -1.37
MSH6P52701 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.52□□□□□ -1.37
MSH6P52701 AP005901.4-201ENST00000577336 569 ntBASIC6.52□□□□□ -1.37
MSH6P52701 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.52□□□□□ -1.37
MSH6P52701 AC004777.1-201ENST00000624317 287 ntBASIC6.52□□□□□ -1.37
MSH6P52701 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MSH6P52701 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MSH6P52701 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSH6P52701 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MSH6P52701 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.52□□□□□ -1.37
MSH6P52701 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MSH6P52701 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MSH6P52701 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
MSH6P52701 AC063976.2-201ENST00000425667 3556 ntBASIC6.51□□□□□ -1.37
MSH6P52701 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.51□□□□□ -1.37
MSH6P52701 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
MSH6P52701 AC021146.4-201ENST00000309229 279 ntBASIC6.51□□□□□ -1.37
MSH6P52701 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MSH6P52701 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.51□□□□□ -1.37
MSH6P52701 MTND4LP31-201ENST00000514859 294 ntBASIC6.51□□□□□ -1.37
MSH6P52701 Y_RNA.719-201ENST00000517156 106 ntBASIC6.51□□□□□ -1.37
MSH6P52701 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.51□□□□□ -1.37
MSH6P52701 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.51□□□□□ -1.37
MSH6P52701 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.51□□□□□ -1.37
MSH6P52701 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MSH6P52701 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MSH6P52701 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.51□□□□□ -1.37
MSH6P52701 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.51□□□□□ -1.37
MSH6P52701 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH6P52701 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH6P52701 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH6P52701 SNORD46.1-201ENST00000364139 104 ntBASIC6.5□□□□□ -1.37
MSH6P52701 OR1F12-201ENST00000402365 945 ntBASIC6.5□□□□□ -1.37
MSH6P52701 AL136231.1-201ENST00000429407 730 ntBASIC6.5□□□□□ -1.37
MSH6P52701 AC073052.1-201ENST00000440417 714 ntBASIC6.5□□□□□ -1.37
MSH6P52701 OR52E3P-201ENST00000452083 936 ntBASIC6.5□□□□□ -1.37
MSH6P52701 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH6P52701 AP000827.1-201ENST00000527814 258 ntBASIC6.5□□□□□ -1.37
MSH6P52701 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
MSH6P52701 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.5□□□□□ -1.37
MSH6P52701 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH6P52701 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.5□□□□□ -1.37
MSH6P52701 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.5□□□□□ -1.37
MSH6P52701 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.5□□□□□ -1.37
MSH6P52701 AC090506.2-201ENST00000624521 419 ntBASIC6.5□□□□□ -1.37
MSH6P52701 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
MSH6P52701 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.5□□□□□ -1.37
MSH6P52701 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.5□□□□□ -1.37
MSH6P52701 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
MSH6P52701 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH6P52701 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH6P52701 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MSH6P52701 AC108467.2-201ENST00000617640 1597 ntBASIC6.49□□□□□ -1.37
MSH6P52701 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MSH6P52701 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.49□□□□□ -1.37
MSH6P52701 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.49□□□□□ -1.37
MSH6P52701 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.49□□□□□ -1.37
MSH6P52701 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.49□□□□□ -1.37
MSH6P52701 AC041039.1-201ENST00000485656 536 ntBASIC6.49□□□□□ -1.37
MSH6P52701 OR4A2P-201ENST00000527276 913 ntBASIC6.49□□□□□ -1.37
MSH6P52701 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.49□□□□□ -1.37
MSH6P52701 AGGF1P6-201ENST00000569213 976 ntBASIC6.49□□□□□ -1.37
MSH6P52701 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.49□□□□□ -1.37
MSH6P52701 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MSH6P52701 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.49□□□□□ -1.37
MSH6P52701 AC090017.1-201ENST00000548612 1779 ntBASIC6.49□□□□□ -1.37
MSH6P52701 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
MSH6P52701 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
MSH6P52701 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.49□□□□□ -1.37
MSH6P52701 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.49□□□□□ -1.37
MSH6P52701 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MSH6P52701 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MSH6P52701 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MSH6P52701 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MSH6P52701 MIR383-201ENST00000362257 73 ntBASIC6.48□□□□□ -1.37
MSH6P52701 AC007618.1-201ENST00000366455 732 ntBASIC6.48□□□□□ -1.37
MSH6P52701 Z98745.1-201ENST00000402553 494 ntBASIC6.48□□□□□ -1.37
MSH6P52701 CYCSP19-201ENST00000411715 316 ntBASIC6.48□□□□□ -1.37
MSH6P52701 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.48□□□□□ -1.37
MSH6P52701 ARL4AP4-201ENST00000434170 518 ntBASIC6.48□□□□□ -1.37
MSH6P52701 RRM2P4-201ENST00000441721 562 ntBASIC6.48□□□□□ -1.37
MSH6P52701 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.48□□□□□ -1.37
MSH6P52701 RPL7L1P8-201ENST00000469911 741 ntBASIC6.48□□□□□ -1.37
MSH6P52701 RPS27AP16-201ENST00000492222 470 ntBASIC6.48□□□□□ -1.37
MSH6P52701 AL133372.1-201ENST00000493565 745 ntBASIC6.48□□□□□ -1.37
MSH6P52701 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.48□□□□□ -1.37
MSH6P52701 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms