Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
GTF2A1P52655 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
GTF2A1P52655 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
GTF2A1P52655 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 OR56B2P-201ENST00000317102 954 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 RNA5SP22-201ENST00000365393 109 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.58□□□□□ -1.68
GTF2A1P52655 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.58□□□□□ -1.68
GTF2A1P52655 RANP7-201ENST00000418085 644 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.58□□□□□ -1.68
GTF2A1P52655 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.58□□□□□ -1.68
GTF2A1P52655 AC017083.1-201ENST00000428093 483 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 RBMY2TP-201ENST00000451162 947 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 EIF4A1P11-201ENST00000451239 222 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 PPIAP15-201ENST00000479662 484 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 SNORA70.14-201ENST00000516205 110 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 RNA5SP271-201ENST00000516700 88 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 RN7SKP183-201ENST00000517169 324 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
GTF2A1P52655 AC090515.3-201ENST00000560431 315 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.58□□□□□ -1.68
GTF2A1P52655 AC023813.4-201ENST00000607580 580 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 AL391261.4-201ENST00000616012 481 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 RN7SL722P-201ENST00000617780 284 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 RN7SL565P-201ENST00000618246 284 ntBASIC4.58□□□□□ -1.68
GTF2A1P52655 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
GTF2A1P52655 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
GTF2A1P52655 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF2A1P52655 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF2A1P52655 AC053481.2-202ENST00000582394 1500 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
GTF2A1P52655 CYP1D1P-201ENST00000416662 1433 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.57□□□□□ -1.68
GTF2A1P52655 AC027290.2-201ENST00000623210 18662 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 MIR133B-201ENST00000362210 119 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 RNU1-87P-201ENST00000363727 170 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF2A1P52655 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.57□□□□□ -1.68
GTF2A1P52655 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.57□□□□□ -1.68
GTF2A1P52655 SEC63P1-201ENST00000425785 1258 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.57□□□□□ -1.68
GTF2A1P52655 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.57□□□□□ -1.68
GTF2A1P52655 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.57□□□□□ -1.68
GTF2A1P52655 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.57□□□□□ -1.68
GTF2A1P52655 NARSP2-201ENST00000518524 679 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 NRBF2P4-201ENST00000520874 850 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.57□□□□□ -1.68
GTF2A1P52655 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.57□□□□□ -1.68
GTF2A1P52655 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.57□□□□□ -1.68
GTF2A1P52655 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GTF2A1P52655 AL049872.1-201ENST00000556323 322 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.57□□□□□ -1.68
GTF2A1P52655 RBM22P1-201ENST00000578589 1214 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.57□□□□□ -1.68
GTF2A1P52655 AL359091.2-201ENST00000609303 556 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 AL591926.8-201ENST00000616876 211 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 AL591926.1-201ENST00000620542 217 ntBASIC4.57□□□□□ -1.68
GTF2A1P52655 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
GTF2A1P52655 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF2A1P52655 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF2A1P52655 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GTF2A1P52655 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
GTF2A1P52655 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.57□□□□□ -1.68
GTF2A1P52655 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GTF2A1P52655 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GTF2A1P52655 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GTF2A1P52655 RPS4XP5-202ENST00000449995 1334 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
GTF2A1P52655 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.56□□□□□ -1.68
GTF2A1P52655 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GTF2A1P52655 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
GTF2A1P52655 MIR105-1-201ENST00000385222 81 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
GTF2A1P52655 AL596448.1-201ENST00000415024 392 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 AC093155.2-201ENST00000420734 937 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 AL159169.1-201ENST00000421119 127 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF2A1P52655 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF2A1P52655 SNRPFP2-201ENST00000440710 251 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 TXNP5-201ENST00000441043 315 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF2A1P52655 AC104651.2-201ENST00000447549 528 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF2A1P52655 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.56□□□□□ -1.68
GTF2A1P52655 IFNWP4-201ENST00000453148 294 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 AL691482.1-201ENST00000453255 87 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 RPL5P32-201ENST00000454085 879 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 RN7SL799P-201ENST00000475891 298 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 AC090142.2-201ENST00000483263 416 ntBASIC4.56□□□□□ -1.68
GTF2A1P52655 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.56□□□□□ -1.68
GTF2A1P52655 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms