Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC114973.1-201ENST00000429057 632 ntBASIC5.73□□□□□ -1.49
NEK3P51956 MTCYBP15-201ENST00000433123 1127 ntBASIC5.73□□□□□ -1.49
NEK3P51956 MTCO1P53-201ENST00000441633 699 ntBASIC5.73□□□□□ -1.49
NEK3P51956 LINC02210-201ENST00000444561 288 ntBASIC5.73□□□□□ -1.49
NEK3P51956 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.73□□□□□ -1.49
NEK3P51956 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.73□□□□□ -1.49
NEK3P51956 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
NEK3P51956 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.73□□□□□ -1.49
NEK3P51956 NRBF2P4-201ENST00000520874 850 ntBASIC5.73□□□□□ -1.49
NEK3P51956 AL359219.2-201ENST00000555184 348 ntBASIC5.73□□□□□ -1.49
NEK3P51956 AC007225.2-201ENST00000562529 256 ntBASIC5.73□□□□□ -1.49
NEK3P51956 MTND1P8-201ENST00000571424 950 ntBASIC5.73□□□□□ -1.49
NEK3P51956 AC112220.2-201ENST00000605513 533 ntBASIC5.73□□□□□ -1.49
NEK3P51956 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.73□□□□□ -1.49
NEK3P51956 AC010632.3-201ENST00000611377 369 ntBASIC5.73□□□□□ -1.49
NEK3P51956 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.73□□□□□ -1.49
NEK3P51956 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NEK3P51956 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NEK3P51956 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.73□□□□□ -1.49
NEK3P51956 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.72□□□□□ -1.49
NEK3P51956 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.72□□□□□ -1.49
NEK3P51956 USP9YP4-201ENST00000424401 1745 ntBASIC5.72□□□□□ -1.49
NEK3P51956 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NEK3P51956 RNA5SP326-201ENST00000363209 110 ntBASIC5.72□□□□□ -1.49
NEK3P51956 RNU6-353P-201ENST00000364266 108 ntBASIC5.72□□□□□ -1.49
NEK3P51956 RNA5SP131-201ENST00000365452 119 ntBASIC5.72□□□□□ -1.49
NEK3P51956 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NEK3P51956 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 MTATP6P31-201ENST00000406985 692 ntBASIC5.72□□□□□ -1.49
NEK3P51956 OR3A2-201ENST00000408891 1076 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC096921.1-201ENST00000411661 375 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 MTND4P3-201ENST00000417829 541 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.72□□□□□ -1.49
NEK3P51956 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 AC092634.2-201ENST00000428146 1010 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AL136231.1-201ENST00000429407 730 ntBASIC5.72□□□□□ -1.49
NEK3P51956 RPL21P110-201ENST00000433345 446 ntBASIC5.72□□□□□ -1.49
NEK3P51956 RRM2P4-201ENST00000441721 562 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.72□□□□□ -1.49
NEK3P51956 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.72□□□□□ -1.49
NEK3P51956 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.72□□□□□ -1.49
NEK3P51956 MEMO1P4-201ENST00000453590 386 ntBASIC5.72□□□□□ -1.49
NEK3P51956 RNU7-140P-201ENST00000459546 60 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.72□□□□□ -1.49
NEK3P51956 ATP5LP3-201ENST00000514223 304 ntBASIC5.72□□□□□ -1.49
NEK3P51956 SCARNA21.2-201ENST00000516600 166 ntBASIC5.72□□□□□ -1.49
NEK3P51956 RN7SKP283-201ENST00000517197 270 ntBASIC5.72□□□□□ -1.49
NEK3P51956 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 AC091163.3-201ENST00000518269 1144 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AP001207.2-201ENST00000519490 539 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.72□□□□□ -1.49
NEK3P51956 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.72□□□□□ -1.49
NEK3P51956 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.72□□□□□ -1.49
NEK3P51956 MIR1273E-201ENST00000581165 102 ntBASIC5.72□□□□□ -1.49
NEK3P51956 MIR4760-201ENST00000585040 80 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.72□□□□□ -1.49
NEK3P51956 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 AC096553.1-201ENST00000605169 829 ntBASIC5.72□□□□□ -1.49
NEK3P51956 VN1R74P-201ENST00000613259 503 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AL050303.3-201ENST00000613704 284 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC022467.1-201ENST00000614738 749 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC018926.3-201ENST00000618841 406 ntBASIC5.72□□□□□ -1.49
NEK3P51956 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 AC104985.3-201ENST00000623479 597 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 OR2L1P-202ENST00000641567 1023 ntBASIC5.72□□□□□ -1.49
NEK3P51956 AC002525.1-201ENST00000624392 1622 ntBASIC5.72□□□□□ -1.49
NEK3P51956 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
NEK3P51956 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEK3P51956 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NEK3P51956 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NEK3P51956 AC119744.1-201ENST00000454746 1715 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms