Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AP003400.2-201ENST00000624036 666 ntBASIC8□□□□□ -1.13
SMARCA4P51532 AC004777.1-201ENST00000624317 287 ntBASIC8□□□□□ -1.13
SMARCA4P51532 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
SMARCA4P51532 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8□□□□□ -1.13
SMARCA4P51532 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
SMARCA4P51532 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SMARCA4P51532 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8□□□□□ -1.13
SMARCA4P51532 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC8□□□□□ -1.13
SMARCA4P51532 AL590806.1-201ENST00000415818 853 ntBASIC8□□□□□ -1.13
SMARCA4P51532 Z74021.1-201ENST00000423610 407 ntBASIC8□□□□□ -1.13
SMARCA4P51532 EIF4HP2-201ENST00000424380 563 ntBASIC8□□□□□ -1.13
SMARCA4P51532 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC8□□□□□ -1.13
SMARCA4P51532 AL445584.1-201ENST00000431451 330 ntBASIC8□□□□□ -1.13
SMARCA4P51532 NPM1P41-201ENST00000512920 831 ntBASIC8□□□□□ -1.13
SMARCA4P51532 SUMO2P19-201ENST00000518920 295 ntBASIC8□□□□□ -1.13
SMARCA4P51532 CCNG2P1-201ENST00000549521 1000 ntBASIC8□□□□□ -1.13
SMARCA4P51532 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
SMARCA4P51532 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.99□□□□□ -1.13
SMARCA4P51532 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 AC106871.1-201ENST00000568324 3102 ntBASIC7.99□□□□□ -1.13
SMARCA4P51532 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
SMARCA4P51532 DDX18P5-201ENST00000534547 1306 ntBASIC7.99□□□□□ -1.13
SMARCA4P51532 RNA5SP124-201ENST00000362739 110 ntBASIC7.99□□□□□ -1.13
SMARCA4P51532 PCNPP4-201ENST00000414817 517 ntBASIC7.99□□□□□ -1.13
SMARCA4P51532 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC7.99□□□□□ -1.13
SMARCA4P51532 RNA5SP49-201ENST00000516450 115 ntBASIC7.99□□□□□ -1.13
SMARCA4P51532 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.99□□□□□ -1.13
SMARCA4P51532 RNU4-89P-201ENST00000607443 133 ntBASIC7.99□□□□□ -1.13
SMARCA4P51532 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SMARCA4P51532 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
SMARCA4P51532 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.99□□□□□ -1.13
SMARCA4P51532 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC7.98□□□□□ -1.13
SMARCA4P51532 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SMARCA4P51532 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
SMARCA4P51532 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.98□□□□□ -1.13
SMARCA4P51532 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SMARCA4P51532 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.98□□□□□ -1.13
SMARCA4P51532 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SMARCA4P51532 RNA5SP130-201ENST00000364431 114 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 AC097374.1-203ENST00000400783 485 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 RN7SKP202-201ENST00000410439 330 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 AL157831.1-201ENST00000426134 473 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 RPL23AP83-201ENST00000434984 473 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 RPL6P5-201ENST00000445678 828 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
SMARCA4P51532 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.98□□□□□ -1.13
SMARCA4P51532 LINC01808-202ENST00000641680 1116 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SMARCA4P51532 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SMARCA4P51532 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SMARCA4P51532 AC092376.2-201ENST00000622621 4116 ntBASIC7.98□□□□□ -1.13
SMARCA4P51532 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SMARCA4P51532 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.97□□□□□ -1.13
SMARCA4P51532 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC7.97□□□□□ -1.13
SMARCA4P51532 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.97□□□□□ -1.13
SMARCA4P51532 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC7.97□□□□□ -1.13
SMARCA4P51532 MRPL50P1-201ENST00000431951 384 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.97□□□□□ -1.13
SMARCA4P51532 BTF3P6-201ENST00000448054 499 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 AL049874.2-201ENST00000492636 288 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 AC146944.2-203ENST00000502493 354 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.97□□□□□ -1.13
SMARCA4P51532 AC139495.1-202ENST00000513164 354 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.97□□□□□ -1.13
SMARCA4P51532 AC079587.1-201ENST00000603846 277 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 AL161756.2-201ENST00000604597 246 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 MIR6875-201ENST00000617506 72 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 AP005435.3-201ENST00000531260 3198 ntBASIC7.97□□□□□ -1.13
SMARCA4P51532 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.97□□□□□ -1.13
SMARCA4P51532 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SMARCA4P51532 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.97□□□□□ -1.13
SMARCA4P51532 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SMARCA4P51532 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SMARCA4P51532 MT-RNR1-201ENST00000389680 954 ntBASIC7.96□□□□□ -1.13
SMARCA4P51532 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.96□□□□□ -1.13
SMARCA4P51532 AL133547.1-201ENST00000448546 220 ntBASIC7.96□□□□□ -1.13
SMARCA4P51532 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.96□□□□□ -1.13
SMARCA4P51532 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC7.96□□□□□ -1.13
SMARCA4P51532 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.96□□□□□ -1.13
SMARCA4P51532 FAM27D1-201ENST00000612308 341 ntBASIC7.96□□□□□ -1.13
SMARCA4P51532 AC015804.1-201ENST00000622935 435 ntBASIC7.96□□□□□ -1.13
SMARCA4P51532 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SMARCA4P51532 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.96□□□□□ -1.13
SMARCA4P51532 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
SMARCA4P51532 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SMARCA4P51532 SNORA11.1-201ENST00000408133 129 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms