Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 RNU1-20P-201ENST00000363314 162 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 RNA5SP507-201ENST00000363603 121 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC1A1P43005 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 RNA5SP372-201ENST00000390836 115 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC1A1P43005 RPS24P12-201ENST00000402084 394 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 RPL23AP27-201ENST00000415161 451 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC1A1P43005 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 RPL21P91-201ENST00000429231 479 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 NRBF2P3-201ENST00000432731 865 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC1A1P43005 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC1A1P43005 AL591363.1-201ENST00000450091 483 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 AC016687.1-201ENST00000482574 353 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SLC1A1P43005 RNA5SP446-201ENST00000515955 82 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC1A1P43005 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC1A1P43005 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC1A1P43005 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC1A1P43005 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SLC1A1P43005 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC1A1P43005 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
SLC1A1P43005 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
SLC1A1P43005 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 AC135352.1-201ENST00000506173 1418 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC1A1P43005 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC1A1P43005 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 IL6STP1-201ENST00000346911 1020 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 RN7SKP104-201ENST00000362605 328 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 SNORA51.1-201ENST00000363243 140 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 RNU4-34P-201ENST00000410431 124 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC1A1P43005 CYCSP10-201ENST00000417973 294 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 OR2B7P-201ENST00000429302 934 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 snoU13.20-201ENST00000459180 104 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 RN7SL41P-201ENST00000476144 297 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 AC113430.1-201ENST00000506872 718 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 AC147055.3-201ENST00000510547 851 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 AC021146.3-201ENST00000511911 260 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC1A1P43005 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC1A1P43005 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC1A1P43005 AC021006.3-201ENST00000530771 192 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC1A1P43005 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC1A1P43005 EDDM3DP-201ENST00000554692 434 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC1A1P43005 AC027455.1-201ENST00000574104 594 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 RN7SL652P-201ENST00000577769 300 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC1A1P43005 RN7SL52P-201ENST00000584271 284 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 AC091178.1-203ENST00000584586 279 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC1A1P43005 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC1A1P43005 AL713998.2-201ENST00000604538 1198 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 uc_338.18-201ENST00000615451 175 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SLC1A1P43005 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC1A1P43005 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 CUL4AP1-201ENST00000514750 1863 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC1A1P43005 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 LINC01109-201ENST00000603837 3081 ntBASIC4.87□□□□□ -1.63
SLC1A1P43005 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SLC1A1P43005 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC1A1P43005 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC1A1P43005 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
SLC1A1P43005 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC1A1P43005 MTND5P23-201ENST00000430812 1655 ntBASIC4.86□□□□□ -1.63
SLC1A1P43005 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC1A1P43005 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC1A1P43005 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SLC1A1P43005 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC1A1P43005 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC1A1P43005 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SLC1A1P43005 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC1A1P43005 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms