Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC024558.1-201ENST00000505008 528 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 RPS4XP20-201ENST00000505751 772 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.02□□□□□ -1.61
HNF4AP41235 AF186190.1-201ENST00000517470 480 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.02□□□□□ -1.61
HNF4AP41235 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.02□□□□□ -1.61
HNF4AP41235 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.02□□□□□ -1.61
HNF4AP41235 AC004825.1-201ENST00000555068 586 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 MIR1269B-201ENST00000580405 75 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 IMMP1LP3-201ENST00000604197 224 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 AC005014.3-201ENST00000605985 190 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 AC110792.4-201ENST00000609843 298 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 AP005131.7-201ENST00000610087 611 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 AC243654.2-201ENST00000612843 443 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 MIR7973-1-201ENST00000614683 76 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 AC008115.4-201ENST00000619780 775 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 AC116563.2-201ENST00000624751 535 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HNF4AP41235 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.01□□□□□ -1.61
HNF4AP41235 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 RNA5SP183-201ENST00000362452 119 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 SNORA62.2-201ENST00000364672 152 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.01□□□□□ -1.61
HNF4AP41235 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 RNU6-452P-201ENST00000384406 107 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 MIR600-201ENST00000385007 98 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 NUDT19P3-201ENST00000404698 555 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.01□□□□□ -1.61
HNF4AP41235 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.01□□□□□ -1.61
HNF4AP41235 HMGB1P5-202ENST00000451497 985 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.01□□□□□ -1.61
HNF4AP41235 Z92846.1-201ENST00000456203 268 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AC245028.2-201ENST00000458673 253 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 RPS26P39-201ENST00000469206 341 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AC116562.1-201ENST00000485355 781 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.01□□□□□ -1.61
HNF4AP41235 AC097173.1-201ENST00000505862 819 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 GTF2F2P1-201ENST00000511083 675 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.01□□□□□ -1.61
HNF4AP41235 AC018695.5-201ENST00000605872 315 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AL512329.2-201ENST00000607350 548 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AC100847.1-201ENST00000611316 481 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AC123768.4-201ENST00000616244 701 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.01□□□□□ -1.61
HNF4AP41235 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.01□□□□□ -1.61
HNF4AP41235 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.01□□□□□ -1.61
HNF4AP41235 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.01□□□□□ -1.61
HNF4AP41235 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.01□□□□□ -1.61
HNF4AP41235 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.01□□□□□ -1.61
HNF4AP41235 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HNF4AP41235 CASC19-204ENST00000641001 2055 ntBASIC5.01□□□□□ -1.61
HNF4AP41235 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.01□□□□□ -1.61
HNF4AP41235 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HNF4AP41235 Z95327.2-201ENST00000414579 1873 ntBASIC5□□□□□ -1.61
HNF4AP41235 AP001642.1-201ENST00000624727 2117 ntBASIC5□□□□□ -1.61
HNF4AP41235 ZNF652P1-201ENST00000442420 1309 ntBASIC5□□□□□ -1.61
HNF4AP41235 AC063976.2-201ENST00000425667 3556 ntBASIC5□□□□□ -1.61
HNF4AP41235 AL731532.2-201ENST00000623542 1953 ntBASIC5□□□□□ -1.61
HNF4AP41235 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HNF4AP41235 AL731566.1-201ENST00000620490 1937 ntBASIC5□□□□□ -1.61
HNF4AP41235 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5□□□□□ -1.61
HNF4AP41235 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5□□□□□ -1.61
HNF4AP41235 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
HNF4AP41235 RNU6-171P-201ENST00000384354 107 ntBASIC5□□□□□ -1.61
HNF4AP41235 AL390316.1-201ENST00000406279 553 ntBASIC5□□□□□ -1.61
HNF4AP41235 RPL31P52-201ENST00000407532 367 ntBASIC5□□□□□ -1.61
HNF4AP41235 MIR1286-201ENST00000408112 78 ntBASIC5□□□□□ -1.61
HNF4AP41235 AP000534.2-201ENST00000412729 568 ntBASIC5□□□□□ -1.61
HNF4AP41235 SLC35E1P1-201ENST00000419313 864 ntBASIC5□□□□□ -1.61
HNF4AP41235 AL355433.1-201ENST00000422804 300 ntBASIC5□□□□□ -1.61
HNF4AP41235 AC108075.1-201ENST00000424692 529 ntBASIC5□□□□□ -1.61
HNF4AP41235 RPS4XP16-201ENST00000427198 791 ntBASIC5□□□□□ -1.61
HNF4AP41235 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5□□□□□ -1.61
HNF4AP41235 AL031663.1-201ENST00000437445 219 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms