Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CPS1P31327 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CPS1P31327 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CPS1P31327 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.55□□□□□ -1.36
CPS1P31327 AP001160.4-201ENST00000596971 382 ntBASIC6.55□□□□□ -1.36
CPS1P31327 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.55□□□□□ -1.36
CPS1P31327 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.55□□□□□ -1.36
CPS1P31327 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CPS1P31327 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CPS1P31327 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CPS1P31327 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CPS1P31327 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CPS1P31327 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.55□□□□□ -1.36
CPS1P31327 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CPS1P31327 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CPS1P31327 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CPS1P31327 AL360270.2-201ENST00000562952 5985 ntBASIC6.55□□□□□ -1.36
CPS1P31327 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CPS1P31327 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CPS1P31327 COX5BP7-201ENST00000414780 274 ntBASIC6.55□□□□□ -1.36
CPS1P31327 RPL23AP38-201ENST00000423801 469 ntBASIC6.55□□□□□ -1.36
CPS1P31327 AL117339.2-201ENST00000430475 180 ntBASIC6.55□□□□□ -1.36
CPS1P31327 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CPS1P31327 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.55□□□□□ -1.36
CPS1P31327 VN1R92P-201ENST00000598511 928 ntBASIC6.55□□□□□ -1.36
CPS1P31327 AF131215.7-201ENST00000602443 707 ntBASIC6.55□□□□□ -1.36
CPS1P31327 AC015908.5-201ENST00000623289 343 ntBASIC6.55□□□□□ -1.36
CPS1P31327 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.54□□□□□ -1.36
CPS1P31327 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 TCP11X1-202ENST00000622971 1372 ntBASIC6.54□□□□□ -1.36
CPS1P31327 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC6.54□□□□□ -1.36
CPS1P31327 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.54□□□□□ -1.36
CPS1P31327 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 DHX9P1-201ENST00000436565 3076 ntBASIC6.54□□□□□ -1.36
CPS1P31327 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CPS1P31327 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.54□□□□□ -1.36
CPS1P31327 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CPS1P31327 RPL21P67-201ENST00000402896 478 ntBASIC6.54□□□□□ -1.36
CPS1P31327 OR8G2P-201ENST00000412796 908 ntBASIC6.54□□□□□ -1.36
CPS1P31327 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.54□□□□□ -1.36
CPS1P31327 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.54□□□□□ -1.36
CPS1P31327 AC093014.1-201ENST00000548926 724 ntBASIC6.54□□□□□ -1.36
CPS1P31327 CCNG2P1-201ENST00000549521 1000 ntBASIC6.54□□□□□ -1.36
CPS1P31327 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.54□□□□□ -1.36
CPS1P31327 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.54□□□□□ -1.36
CPS1P31327 AL451086.1-201ENST00000605596 223 ntBASIC6.54□□□□□ -1.36
CPS1P31327 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC6.54□□□□□ -1.36
CPS1P31327 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CPS1P31327 EIF2AP4-201ENST00000424793 1781 ntBASIC6.53□□□□□ -1.36
CPS1P31327 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CPS1P31327 AL031119.1-201ENST00000404707 1879 ntBASIC6.53□□□□□ -1.36
CPS1P31327 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CPS1P31327 SDHCP2-201ENST00000398565 501 ntBASIC6.53□□□□□ -1.36
CPS1P31327 RPS27AP11-201ENST00000402798 447 ntBASIC6.53□□□□□ -1.36
CPS1P31327 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.53□□□□□ -1.36
CPS1P31327 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.53□□□□□ -1.36
CPS1P31327 AC092162.1-201ENST00000432828 434 ntBASIC6.53□□□□□ -1.36
CPS1P31327 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.53□□□□□ -1.36
CPS1P31327 RPS3AP12-201ENST00000443616 753 ntBASIC6.53□□□□□ -1.36
CPS1P31327 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.53□□□□□ -1.36
CPS1P31327 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.53□□□□□ -1.36
CPS1P31327 RPS27AP16-201ENST00000492222 470 ntBASIC6.53□□□□□ -1.36
CPS1P31327 NPM1P41-201ENST00000512920 831 ntBASIC6.53□□□□□ -1.36
CPS1P31327 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.53□□□□□ -1.36
CPS1P31327 AL049830.4-201ENST00000555149 351 ntBASIC6.53□□□□□ -1.36
CPS1P31327 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.53□□□□□ -1.36
CPS1P31327 AC073137.1-201ENST00000605636 634 ntBASIC6.53□□□□□ -1.36
CPS1P31327 AP003497.2-201ENST00000624220 967 ntBASIC6.53□□□□□ -1.36
CPS1P31327 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CPS1P31327 LARP1BP1-201ENST00000506036 1359 ntBASIC6.53□□□□□ -1.36
CPS1P31327 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.53□□□□□ -1.36
CPS1P31327 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.53□□□□□ -1.36
CPS1P31327 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.53□□□□□ -1.36
CPS1P31327 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CPS1P31327 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CPS1P31327 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
CPS1P31327 NPM1P36-201ENST00000415681 835 ntBASIC6.52□□□□□ -1.37
CPS1P31327 AL451139.1-201ENST00000434718 346 ntBASIC6.52□□□□□ -1.37
CPS1P31327 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.52□□□□□ -1.37
CPS1P31327 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
CPS1P31327 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
CPS1P31327 TMEM30CP-203ENST00000637814 1035 ntBASIC6.52□□□□□ -1.37
CPS1P31327 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.52□□□□□ -1.37
CPS1P31327 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
CPS1P31327 MAPK10-328ENST00000641553 4009 ntBASIC6.52□□□□□ -1.37
CPS1P31327 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.52□□□□□ -1.37
CPS1P31327 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CPS1P31327 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CPS1P31327 VN2R3P-201ENST00000422626 1412 ntBASIC6.52□□□□□ -1.37
CPS1P31327 RNA5SP513-201ENST00000364648 118 ntBASIC6.51□□□□□ -1.37
CPS1P31327 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.51□□□□□ -1.37
CPS1P31327 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.51□□□□□ -1.37
CPS1P31327 RPL7P2-201ENST00000427639 268 ntBASIC6.51□□□□□ -1.37
CPS1P31327 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CPS1P31327 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms