Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 AL132640.2-201ENST00000559968 1698 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 OR4G1P-202ENST00000641173 1788 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 DDX18P5-201ENST00000534547 1306 ntBASIC3.96□□□□□ -1.77
COL8A2P25067 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
COL8A2P25067 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.96□□□□□ -1.77
COL8A2P25067 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.96□□□□□ -1.78
COL8A2P25067 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL8A2P25067 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL8A2P25067 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL8A2P25067 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL8A2P25067 TRAV35-201ENST00000390462 330 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 AL590762.2-201ENST00000395798 571 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 AL359643.1-201ENST00000404109 423 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.96□□□□□ -1.78
COL8A2P25067 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.96□□□□□ -1.78
COL8A2P25067 NIPA2P1-201ENST00000426223 976 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 RPL34P6-201ENST00000432390 345 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 H2AFZP5-201ENST00000446960 382 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.96□□□□□ -1.78
COL8A2P25067 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.96□□□□□ -1.78
COL8A2P25067 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.96□□□□□ -1.78
COL8A2P25067 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.96□□□□□ -1.78
COL8A2P25067 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.96□□□□□ -1.78
COL8A2P25067 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.96□□□□□ -1.78
COL8A2P25067 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.96□□□□□ -1.78
COL8A2P25067 AL049830.4-201ENST00000555149 351 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.96□□□□□ -1.78
COL8A2P25067 AC020915.5-201ENST00000596836 964 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 OR7A19P-201ENST00000608051 733 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 MIR6810-201ENST00000622701 70 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.96□□□□□ -1.78
COL8A2P25067 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL8A2P25067 STX3-208ENST00000641815 3236 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL8A2P25067 PCAT14-202ENST00000627127 3935 ntBASIC3.96□□□□□ -1.78
COL8A2P25067 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL8A2P25067 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL8A2P25067 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL8A2P25067 KARSP3-201ENST00000571212 1504 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.95□□□□□ -1.78
COL8A2P25067 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL8A2P25067 AL136164.3-201ENST00000624429 3978 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL8A2P25067 AL022322.2-201ENST00000624072 20397 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
COL8A2P25067 MTCO1P46-201ENST00000451639 1491 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL8A2P25067 E2F6P2-201ENST00000420708 748 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 RPL23AP1-201ENST00000428990 471 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 AC016712.1-201ENST00000431088 378 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 AC004938.1-201ENST00000438468 308 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.95□□□□□ -1.78
COL8A2P25067 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.95□□□□□ -1.78
COL8A2P25067 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.95□□□□□ -1.78
COL8A2P25067 AC090686.1-201ENST00000481577 749 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 NPM1P29-201ENST00000483112 803 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.95□□□□□ -1.78
COL8A2P25067 HPRT1P1-201ENST00000509498 657 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.95□□□□□ -1.78
COL8A2P25067 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.95□□□□□ -1.78
COL8A2P25067 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.95□□□□□ -1.78
COL8A2P25067 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.95□□□□□ -1.78
COL8A2P25067 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.95□□□□□ -1.78
COL8A2P25067 AC233702.9-201ENST00000581528 203 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 RPL26P30-202ENST00000602923 645 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 AC073137.1-201ENST00000605636 634 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 AL023583.1-201ENST00000607518 1143 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 MIR378J-201ENST00000611988 109 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 OR8G7P-201ENST00000616658 848 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 AC015871.5-202ENST00000623252 701 ntBASIC3.95□□□□□ -1.78
COL8A2P25067 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.95□□□□□ -1.78
COL8A2P25067 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.95□□□□□ -1.78
COL8A2P25067 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL8A2P25067 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.95□□□□□ -1.78
COL8A2P25067 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
COL8A2P25067 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL8A2P25067 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL8A2P25067 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 AC021242.1-201ENST00000507315 2035 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.94□□□□□ -1.78
COL8A2P25067 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.94□□□□□ -1.78
COL8A2P25067 AC139713.2-214ENST00000642059 1811 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.94□□□□□ -1.78
COL8A2P25067 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL8A2P25067 OR51B3P-201ENST00000412287 913 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.94□□□□□ -1.78
COL8A2P25067 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.94□□□□□ -1.78
COL8A2P25067 AC013410.1-201ENST00000436223 1232 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AC108463.1-201ENST00000450258 347 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 AC090589.1-201ENST00000473109 362 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms