Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
PTPREP23469 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 RNU6-26P-201ENST00000383985 107 ntBASIC8.34□□□□□ -1.07
PTPREP23469 RN7SKP221-201ENST00000410420 301 ntBASIC8.34□□□□□ -1.07
PTPREP23469 RN7SKP268-201ENST00000411107 316 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC127391.1-201ENST00000411737 98 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 FTLP17-201ENST00000432567 525 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC8.34□□□□□ -1.07
PTPREP23469 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 AL353093.1-201ENST00000441292 436 ntBASIC8.34□□□□□ -1.07
PTPREP23469 H2AFZP6-201ENST00000444403 394 ntBASIC8.34□□□□□ -1.07
PTPREP23469 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPREP23469 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 RPL26P28-201ENST00000451325 435 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC022080.2-201ENST00000452932 533 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 APOOP2-201ENST00000461561 539 ntBASIC8.34□□□□□ -1.07
PTPREP23469 RPL23P10-201ENST00000468780 412 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC068781.1-201ENST00000488231 618 ntBASIC8.34□□□□□ -1.07
PTPREP23469 RN7SL306P-201ENST00000492941 296 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPREP23469 AC025164.1-201ENST00000496249 478 ntBASIC8.34□□□□□ -1.07
PTPREP23469 EIF4EP3-201ENST00000498782 656 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 RPL38P4-201ENST00000502376 214 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPREP23469 CARSP2-201ENST00000520688 277 ntBASIC8.34□□□□□ -1.07
PTPREP23469 ST13P6-201ENST00000522430 1102 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC022861.1-201ENST00000522981 663 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 TRAV15-201ENST00000556680 249 ntBASIC8.34□□□□□ -1.07
PTPREP23469 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 AC138207.8-204ENST00000579588 527 ntBASIC8.34□□□□□ -1.07
PTPREP23469 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 RPS27AP19-201ENST00000597285 458 ntBASIC8.34□□□□□ -1.07
PTPREP23469 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 AL133173.2-201ENST00000614270 90 ntBASIC8.34□□□□□ -1.07
PTPREP23469 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPREP23469 AC009318.4-201ENST00000620496 486 ntBASIC8.34□□□□□ -1.07
PTPREP23469 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPREP23469 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
PTPREP23469 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPREP23469 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.08
PTPREP23469 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.08
PTPREP23469 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
PTPREP23469 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPREP23469 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 RNU6-216P-201ENST00000363282 104 ntBASIC8.33□□□□□ -1.08
PTPREP23469 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 AL672167.2-201ENST00000377164 879 ntBASIC8.33□□□□□ -1.08
PTPREP23469 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 RNU2-8P-201ENST00000410727 190 ntBASIC8.33□□□□□ -1.08
PTPREP23469 RN7SKP247-201ENST00000411094 308 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 AL672212.1-201ENST00000422246 400 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPREP23469 AC009965.2-201ENST00000425328 970 ntBASIC8.33□□□□□ -1.08
PTPREP23469 DUTP6-201ENST00000425573 462 ntBASIC8.33□□□□□ -1.08
PTPREP23469 RPEP2-201ENST00000432149 701 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AL160004.2-201ENST00000432935 350 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPREP23469 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 AC040975.1-201ENST00000472104 316 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC091982.1-202ENST00000473923 343 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC066616.1-201ENST00000486795 413 ntBASIC8.33□□□□□ -1.08
PTPREP23469 RN7SL350P-201ENST00000492591 299 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPREP23469 AC055733.3-201ENST00000505214 523 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC146944.3-201ENST00000509969 371 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.33□□□□□ -1.08
PTPREP23469 GTF2IP11-201ENST00000526931 420 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AP003181.2-201ENST00000528941 181 ntBASIC8.33□□□□□ -1.08
PTPREP23469 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPREP23469 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms