Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.15□□□□□ -1.26
ERCC3P19447 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC3P19447 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC3P19447 FAM32BP-201ENST00000344033 333 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 Y_RNA.18-201ENST00000362461 102 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 RNA5SP284-201ENST00000384547 118 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AL132875.1-201ENST00000403623 949 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 RN7SKP229-201ENST00000410465 302 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 AL513175.1-201ENST00000431492 780 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 NPM1P33-201ENST00000438918 872 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 AP000936.2-201ENST00000447151 681 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.15□□□□□ -1.26
ERCC3P19447 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC005229.2-201ENST00000456995 399 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC3P19447 AC109481.1-201ENST00000509173 282 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC114781.3-201ENST00000512083 142 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 SCARNA21.2-201ENST00000516600 166 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.15□□□□□ -1.26
ERCC3P19447 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC138915.2-201ENST00000569776 97 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.15□□□□□ -1.26
ERCC3P19447 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC023813.4-201ENST00000607580 580 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC092653.1-201ENST00000608509 531 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC103591.3-201ENST00000608684 209 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC127024.6-201ENST00000621598 424 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
ERCC3P19447 AC107982.1-201ENST00000507171 1300 ntBASIC7.15□□□□□ -1.26
ERCC3P19447 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC3P19447 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC3P19447 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC7.15□□□□□ -1.27
ERCC3P19447 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ERCC3P19447 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.15□□□□□ -1.27
ERCC3P19447 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.15□□□□□ -1.27
ERCC3P19447 AC125336.1-201ENST00000508893 2827 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC3P19447 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
ERCC3P19447 AC087752.1-201ENST00000391360 558 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 ZNF736P2Y-201ENST00000416040 1279 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC3P19447 ZNF833P-201ENST00000424938 1494 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 WDR95P-201ENST00000425638 1542 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AC245884.2-201ENST00000426257 404 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 MTCO1P11-201ENST00000429111 1528 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AL451136.1-201ENST00000435399 325 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC3P19447 DDX39BP2-208ENST00000453923 258 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC3P19447 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC7.14□□□□□ -1.27
ERCC3P19447 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
ERCC3P19447 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC3P19447 AC092824.1-201ENST00000483524 576 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC3P19447 RPS7P6-201ENST00000485777 579 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 RPL17P2-201ENST00000491913 451 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC3P19447 RPL7L1P13-201ENST00000511702 739 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AC091965.2-201ENST00000512324 613 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 IGKV2-19-201ENST00000518132 283 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC3P19447 HIGD1AP6-201ENST00000521833 279 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 OR5AK1P-201ENST00000524837 922 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AP003033.1-201ENST00000527244 415 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC3P19447 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC3P19447 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC3P19447 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC3P19447 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC3P19447 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC3P19447 AP005119.1-201ENST00000580956 292 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AC090236.2-201ENST00000587933 1101 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms