Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.82□□□□□ -1.64
XRCC1P18887 AC008072.1-201ENST00000434254 824 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AL392003.1-201ENST00000434394 243 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
XRCC1P18887 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.82□□□□□ -1.64
XRCC1P18887 AC091685.2-201ENST00000454924 864 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AP000942.1-201ENST00000463969 747 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.82□□□□□ -1.64
XRCC1P18887 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
XRCC1P18887 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.82□□□□□ -1.64
XRCC1P18887 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.82□□□□□ -1.64
XRCC1P18887 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.82□□□□□ -1.64
XRCC1P18887 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
XRCC1P18887 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.82□□□□□ -1.64
XRCC1P18887 AL031320.1-201ENST00000604177 357 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AL590410.1-201ENST00000617925 333 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 CR381572.2-201ENST00000624852 397 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
XRCC1P18887 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
XRCC1P18887 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
XRCC1P18887 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
XRCC1P18887 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
XRCC1P18887 MTCO1P8-201ENST00000416914 1523 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
XRCC1P18887 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 RNU6-891P-201ENST00000384280 111 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 GAPDHP15-201ENST00000398586 975 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 LRRC37BP1-201ENST00000398851 714 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.81□□□□□ -1.64
XRCC1P18887 RN7SKP247-201ENST00000411094 308 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 GTF2IP5-201ENST00000414608 731 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.81□□□□□ -1.64
XRCC1P18887 E2F6P2-201ENST00000420708 748 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.81□□□□□ -1.64
XRCC1P18887 SLC25A18P1-201ENST00000449385 454 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 RBMY2TP-201ENST00000451162 947 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.81□□□□□ -1.64
XRCC1P18887 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.81□□□□□ -1.64
XRCC1P18887 DUX4L52-201ENST00000549363 777 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 MTATP6P25-201ENST00000574491 261 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 FAM60CP-201ENST00000591086 664 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.81□□□□□ -1.64
XRCC1P18887 AC020910.3-201ENST00000603701 874 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 AL049794.2-201ENST00000616301 365 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 AC073342.3-201ENST00000624211 193 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
XRCC1P18887 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.81□□□□□ -1.64
XRCC1P18887 AC132825.1-201ENST00000463573 2247 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
XRCC1P18887 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.81□□□□□ -1.64
XRCC1P18887 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.81□□□□□ -1.64
XRCC1P18887 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XRCC1P18887 AP001273.1-201ENST00000624493 3152 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 AC008549.2-201ENST00000333482 706 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 OR13C3-201ENST00000374781 1108 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 AP000580.1-201ENST00000404439 358 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 RN7SKP199-201ENST00000410325 305 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 QRSL1P2-201ENST00000418582 964 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.8□□□□□ -1.64
XRCC1P18887 AC093414.1-201ENST00000434712 514 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.8□□□□□ -1.64
XRCC1P18887 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.8□□□□□ -1.64
XRCC1P18887 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.8□□□□□ -1.64
XRCC1P18887 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.8□□□□□ -1.64
XRCC1P18887 AL691482.1-201ENST00000453255 87 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 RPL23AP56-201ENST00000460778 453 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 RPS17P2-201ENST00000461663 408 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 OR52A4P-203ENST00000498233 1014 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
XRCC1P18887 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.8□□□□□ -1.64
XRCC1P18887 AC117525.1-201ENST00000515228 503 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms