Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
NCK1P16333 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.49□□□□□ -1.69
NCK1P16333 AC093535.2-201ENST00000624769 2326 ntBASIC4.49□□□□□ -1.69
NCK1P16333 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
NCK1P16333 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NCK1P16333 RNA5SP455-201ENST00000365190 119 ntBASIC4.49□□□□□ -1.69
NCK1P16333 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.49□□□□□ -1.69
NCK1P16333 RNU6-225P-201ENST00000384613 103 ntBASIC4.49□□□□□ -1.69
NCK1P16333 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NCK1P16333 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NCK1P16333 AL021331.1-201ENST00000402817 582 ntBASIC4.49□□□□□ -1.69
NCK1P16333 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.49□□□□□ -1.69
NCK1P16333 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.49□□□□□ -1.69
NCK1P16333 AC009237.10-201ENST00000414112 510 ntBASIC4.49□□□□□ -1.69
NCK1P16333 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.49□□□□□ -1.69
NCK1P16333 Z74021.1-201ENST00000423610 407 ntBASIC4.49□□□□□ -1.69
NCK1P16333 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.49□□□□□ -1.69
NCK1P16333 PA2G4P6-201ENST00000438325 1197 ntBASIC4.49□□□□□ -1.69
NCK1P16333 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.49□□□□□ -1.69
NCK1P16333 ARL4AP3-201ENST00000441452 574 ntBASIC4.49□□□□□ -1.69
NCK1P16333 RAD1P2-201ENST00000446414 663 ntBASIC4.49□□□□□ -1.69
NCK1P16333 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.49□□□□□ -1.69
NCK1P16333 AC097484.1-201ENST00000471148 389 ntBASIC4.49□□□□□ -1.69
NCK1P16333 RPL21P6-201ENST00000479171 504 ntBASIC4.49□□□□□ -1.69
NCK1P16333 RN7SL97P-201ENST00000486780 299 ntBASIC4.49□□□□□ -1.69
NCK1P16333 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.49□□□□□ -1.69
NCK1P16333 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.49□□□□□ -1.69
NCK1P16333 OR11J2P-201ENST00000555298 907 ntBASIC4.49□□□□□ -1.69
NCK1P16333 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.49□□□□□ -1.69
NCK1P16333 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.49□□□□□ -1.69
NCK1P16333 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 AC096553.1-201ENST00000605169 829 ntBASIC4.49□□□□□ -1.69
NCK1P16333 BNIP3P7-201ENST00000605641 516 ntBASIC4.49□□□□□ -1.69
NCK1P16333 AC010424.2-201ENST00000607594 443 ntBASIC4.49□□□□□ -1.69
NCK1P16333 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 AC004477.3-201ENST00000614061 590 ntBASIC4.49□□□□□ -1.69
NCK1P16333 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.49□□□□□ -1.69
NCK1P16333 RPL23AP61-201ENST00000623642 466 ntBASIC4.49□□□□□ -1.69
NCK1P16333 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NCK1P16333 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.49□□□□□ -1.69
NCK1P16333 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 HSPD1P14-201ENST00000432666 1618 ntBASIC4.49□□□□□ -1.69
NCK1P16333 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.49□□□□□ -1.69
NCK1P16333 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
NCK1P16333 PHKBP1-201ENST00000450951 1951 ntBASIC4.49□□□□□ -1.69
NCK1P16333 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NCK1P16333 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 AP001002.1-201ENST00000625148 1513 ntBASIC4.48□□□□□ -1.69
NCK1P16333 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NCK1P16333 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.48□□□□□ -1.69
NCK1P16333 RN7SKP104-201ENST00000362605 328 ntBASIC4.48□□□□□ -1.69
NCK1P16333 RNU6-618P-201ENST00000363518 112 ntBASIC4.48□□□□□ -1.69
NCK1P16333 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCK1P16333 RNU6-178P-201ENST00000384631 104 ntBASIC4.48□□□□□ -1.69
NCK1P16333 HDGFP1-201ENST00000405943 252 ntBASIC4.48□□□□□ -1.69
NCK1P16333 RNU6-564P-201ENST00000410983 104 ntBASIC4.48□□□□□ -1.69
NCK1P16333 RPS17P8-201ENST00000434525 335 ntBASIC4.48□□□□□ -1.69
NCK1P16333 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.48□□□□□ -1.69
NCK1P16333 AL137845.2-201ENST00000444292 988 ntBASIC4.48□□□□□ -1.69
NCK1P16333 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.48□□□□□ -1.69
NCK1P16333 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.48□□□□□ -1.69
NCK1P16333 AC016724.1-201ENST00000453215 421 ntBASIC4.48□□□□□ -1.69
NCK1P16333 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.48□□□□□ -1.69
NCK1P16333 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.48□□□□□ -1.69
NCK1P16333 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.48□□□□□ -1.69
NCK1P16333 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.48□□□□□ -1.69
NCK1P16333 AL049779.2-201ENST00000553847 315 ntBASIC4.48□□□□□ -1.69
NCK1P16333 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.48□□□□□ -1.69
NCK1P16333 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.48□□□□□ -1.69
NCK1P16333 AC020978.7-201ENST00000575953 1187 ntBASIC4.48□□□□□ -1.69
NCK1P16333 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.48□□□□□ -1.69
NCK1P16333 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.48□□□□□ -1.69
NCK1P16333 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.48□□□□□ -1.69
NCK1P16333 AC091979.2-201ENST00000607514 214 ntBASIC4.48□□□□□ -1.69
NCK1P16333 AC005021.1-201ENST00000608730 355 ntBASIC4.48□□□□□ -1.69
NCK1P16333 AC079395.2-201ENST00000610982 737 ntBASIC4.48□□□□□ -1.69
NCK1P16333 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.48□□□□□ -1.69
NCK1P16333 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.48□□□□□ -1.69
NCK1P16333 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms