Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.14□□□□□ -1.59
COL11A1P12107 AP005019.3-201ENST00000620418 560 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 AC104118.1-201ENST00000607625 1589 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
COL11A1P12107 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.14□□□□□ -1.59
COL11A1P12107 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 RNA5SP388-201ENST00000362584 119 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 Z98745.1-201ENST00000402553 494 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AL691449.1-201ENST00000426570 421 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.13□□□□□ -1.59
COL11A1P12107 MRPS21P3-201ENST00000436696 262 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL11A1P12107 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL11A1P12107 RN7SL604P-201ENST00000492589 296 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AC008958.1-201ENST00000511047 682 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 GLRXP2-201ENST00000555594 321 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AC084783.1-201ENST00000565846 910 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 BPIFA4P-203ENST00000603168 689 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AC008833.1-201ENST00000611633 691 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 AC006065.6-201ENST00000625201 545 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL11A1P12107 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL11A1P12107 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 AC097063.1-201ENST00000426714 1797 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 MIR331-201ENST00000362302 94 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 SNORA11F-201ENST00000408237 128 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 COX6CP15-201ENST00000426313 211 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL11A1P12107 RPS27AP17-201ENST00000463344 455 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 RPL35P6-201ENST00000490024 372 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL11A1P12107 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.13□□□□□ -1.59
COL11A1P12107 AC084824.1-201ENST00000550917 1005 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.13□□□□□ -1.59
COL11A1P12107 AC091979.2-201ENST00000607514 214 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.13□□□□□ -1.59
COL11A1P12107 AL359922.3-201ENST00000624779 1670 ntBASIC5.13□□□□□ -1.59
COL11A1P12107 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL11A1P12107 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
COL11A1P12107 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.12□□□□□ -1.59
COL11A1P12107 MAPK10-349ENST00000641767 3661 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 OR5P1P-201ENST00000299512 925 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL11A1P12107 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.12□□□□□ -1.59
COL11A1P12107 RPL23AP26-201ENST00000412728 464 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.12□□□□□ -1.59
COL11A1P12107 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.12□□□□□ -1.59
COL11A1P12107 RPEP2-201ENST00000432149 701 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 CR383656.1-201ENST00000484916 377 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.12□□□□□ -1.59
COL11A1P12107 AC108145.1-201ENST00000503770 153 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.12□□□□□ -1.59
COL11A1P12107 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.12□□□□□ -1.59
COL11A1P12107 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.12□□□□□ -1.59
COL11A1P12107 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.12□□□□□ -1.59
COL11A1P12107 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.12□□□□□ -1.59
COL11A1P12107 AC087477.6-201ENST00000559595 843 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.12□□□□□ -1.59
COL11A1P12107 AC002069.2-201ENST00000603580 883 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 AC024941.1-201ENST00000612250 334 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.12□□□□□ -1.59
COL11A1P12107 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL11A1P12107 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.12□□□□□ -1.59
COL11A1P12107 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 AL136164.3-201ENST00000624429 3978 ntBASIC5.12□□□□□ -1.59
COL11A1P12107 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL11A1P12107 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.12□□□□□ -1.59
COL11A1P12107 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.12□□□□□ -1.59
COL11A1P12107 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.12□□□□□ -1.59
COL11A1P12107 AL672167.1-204ENST00000641875 3017 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.11□□□□□ -1.59
COL11A1P12107 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 RPS27AP11-201ENST00000402798 447 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 AL445189.1-201ENST00000405722 338 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RPS20P14-201ENST00000412545 360 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 AL389915.1-201ENST00000422463 466 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 BTF3P10-201ENST00000433415 495 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms