Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCNAP12004 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.15□□□□□ -1.59
PCNAP12004 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 AC007382.1-201ENST00000624376 2618 ntBASIC5.14□□□□□ -1.59
PCNAP12004 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 MIR105-1-201ENST00000385222 81 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AL355615.1-201ENST00000406187 641 ntBASIC5.14□□□□□ -1.59
PCNAP12004 OR4K12P-201ENST00000406538 961 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AL513325.1-201ENST00000417716 1034 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.14□□□□□ -1.59
PCNAP12004 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 NAP1L4P2-201ENST00000425958 899 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 AC104843.2-201ENST00000427666 297 ntBASIC5.14□□□□□ -1.59
PCNAP12004 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.14□□□□□ -1.59
PCNAP12004 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.14□□□□□ -1.59
PCNAP12004 NPM1P33-201ENST00000438918 872 ntBASIC5.14□□□□□ -1.59
PCNAP12004 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.14□□□□□ -1.59
PCNAP12004 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 RPS26P41-201ENST00000450370 284 ntBASIC5.14□□□□□ -1.59
PCNAP12004 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.14□□□□□ -1.59
PCNAP12004 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.14□□□□□ -1.59
PCNAP12004 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 TPT1P1-201ENST00000458495 518 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AC245028.2-201ENST00000458673 253 ntBASIC5.14□□□□□ -1.59
PCNAP12004 RPS20P4-201ENST00000461659 355 ntBASIC5.14□□□□□ -1.59
PCNAP12004 RPL21P6-201ENST00000479171 504 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AC058823.1-201ENST00000485315 474 ntBASIC5.14□□□□□ -1.59
PCNAP12004 NIP7P2-201ENST00000485801 544 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.14□□□□□ -1.59
PCNAP12004 RN7SL346P-201ENST00000491561 294 ntBASIC5.14□□□□□ -1.59
PCNAP12004 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.14□□□□□ -1.59
PCNAP12004 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 HMGB1P40-201ENST00000525121 540 ntBASIC5.14□□□□□ -1.59
PCNAP12004 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.14□□□□□ -1.59
PCNAP12004 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PCNAP12004 HSPD1P14-201ENST00000432666 1618 ntBASIC5.14□□□□□ -1.59
PCNAP12004 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCNAP12004 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCNAP12004 AC000123.3-201ENST00000624029 4975 ntBASIC5.14□□□□□ -1.59
PCNAP12004 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.14□□□□□ -1.59
PCNAP12004 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCNAP12004 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCNAP12004 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCNAP12004 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCNAP12004 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCNAP12004 UGT2B26P-201ENST00000508672 1613 ntBASIC5.13□□□□□ -1.59
PCNAP12004 OR9G4-201ENST00000302957 984 ntBASIC5.13□□□□□ -1.59
PCNAP12004 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
PCNAP12004 RN7SKP15-201ENST00000364742 309 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC007618.1-201ENST00000366455 732 ntBASIC5.13□□□□□ -1.59
PCNAP12004 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCNAP12004 RNU6-468P-201ENST00000384003 109 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.13□□□□□ -1.59
PCNAP12004 TCEA1P2-201ENST00000420496 906 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC005189.1-201ENST00000431286 310 ntBASIC5.13□□□□□ -1.59
PCNAP12004 CYCSP6-201ENST00000434498 302 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC092447.2-201ENST00000435487 669 ntBASIC5.13□□□□□ -1.59
PCNAP12004 RPL7P33-201ENST00000444159 742 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC016772.1-201ENST00000444170 1261 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.13□□□□□ -1.59
PCNAP12004 AC090804.1-201ENST00000448870 490 ntBASIC5.13□□□□□ -1.59
PCNAP12004 CYCSP42-201ENST00000450823 238 ntBASIC5.13□□□□□ -1.59
PCNAP12004 SETP20-201ENST00000457046 852 ntBASIC5.13□□□□□ -1.59
PCNAP12004 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.13□□□□□ -1.59
PCNAP12004 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 RN7SL717P-201ENST00000478343 297 ntBASIC5.13□□□□□ -1.59
PCNAP12004 RN7SL547P-201ENST00000490793 290 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC104109.1-201ENST00000498563 436 ntBASIC5.13□□□□□ -1.59
PCNAP12004 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCNAP12004 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.13□□□□□ -1.59
PCNAP12004 SUMO2P5-201ENST00000506790 245 ntBASIC5.13□□□□□ -1.59
PCNAP12004 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms