Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TOP2AP11388 RNA5SP283-201ENST00000365604 119 ntBASIC7.82□□□□□ -1.16
TOP2AP11388 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TOP2AP11388 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TOP2AP11388 RPL21P65-201ENST00000406094 466 ntBASIC7.82□□□□□ -1.16
TOP2AP11388 RPL23AP38-201ENST00000423801 469 ntBASIC7.82□□□□□ -1.16
TOP2AP11388 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC7.82□□□□□ -1.16
TOP2AP11388 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.82□□□□□ -1.16
TOP2AP11388 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC7.82□□□□□ -1.16
TOP2AP11388 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.82□□□□□ -1.16
TOP2AP11388 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC7.82□□□□□ -1.16
TOP2AP11388 RPS7P7-201ENST00000463499 571 ntBASIC7.82□□□□□ -1.16
TOP2AP11388 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.82□□□□□ -1.16
TOP2AP11388 RN7SL604P-201ENST00000492589 296 ntBASIC7.82□□□□□ -1.16
TOP2AP11388 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC7.82□□□□□ -1.16
TOP2AP11388 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.82□□□□□ -1.16
TOP2AP11388 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.82□□□□□ -1.16
TOP2AP11388 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.82□□□□□ -1.16
TOP2AP11388 LINC01808-202ENST00000641680 1116 ntBASIC7.82□□□□□ -1.16
TOP2AP11388 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.82□□□□□ -1.16
TOP2AP11388 MFSD8-242ENST00000641690 4199 ntBASIC7.82□□□□□ -1.16
TOP2AP11388 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOP2AP11388 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOP2AP11388 CARF-208ENST00000428585 2513 ntTSL 2 BASIC7.81□□□□□ -1.16
TOP2AP11388 AC139769.1-204ENST00000472297 1931 ntBASIC7.81□□□□□ -1.16
TOP2AP11388 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TOP2AP11388 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
TOP2AP11388 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOP2AP11388 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TOP2AP11388 RNU1-85P-201ENST00000364127 164 ntBASIC7.81□□□□□ -1.16
TOP2AP11388 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TOP2AP11388 AC097374.1-203ENST00000400783 485 ntBASIC7.81□□□□□ -1.16
TOP2AP11388 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.81□□□□□ -1.16
TOP2AP11388 TDGF1P1-201ENST00000445734 527 ntBASIC7.81□□□□□ -1.16
TOP2AP11388 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.81□□□□□ -1.16
TOP2AP11388 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.81□□□□□ -1.16
TOP2AP11388 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.81□□□□□ -1.16
TOP2AP11388 RNA5SP143-201ENST00000516936 115 ntBASIC7.81□□□□□ -1.16
TOP2AP11388 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.81□□□□□ -1.16
TOP2AP11388 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.81□□□□□ -1.16
TOP2AP11388 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7.81□□□□□ -1.16
TOP2AP11388 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TOP2AP11388 AC127024.5-201ENST00000580085 462 ntBASIC7.81□□□□□ -1.16
TOP2AP11388 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.81□□□□□ -1.16
TOP2AP11388 BNIP3P33-201ENST00000598912 569 ntBASIC7.81□□□□□ -1.16
TOP2AP11388 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.81□□□□□ -1.16
TOP2AP11388 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TOP2AP11388 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TOP2AP11388 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOP2AP11388 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
TOP2AP11388 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
TOP2AP11388 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TOP2AP11388 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC7.8□□□□□ -1.16
TOP2AP11388 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
TOP2AP11388 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
TOP2AP11388 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 RNA5SP151-201ENST00000365632 117 ntBASIC7.8□□□□□ -1.16
TOP2AP11388 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
TOP2AP11388 RNA5SP171-201ENST00000391071 115 ntBASIC7.8□□□□□ -1.16
TOP2AP11388 AC090686.1-201ENST00000481577 749 ntBASIC7.8□□□□□ -1.16
TOP2AP11388 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC7.8□□□□□ -1.16
TOP2AP11388 AC087477.6-201ENST00000559595 843 ntBASIC7.8□□□□□ -1.16
TOP2AP11388 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.8□□□□□ -1.16
TOP2AP11388 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.8□□□□□ -1.16
TOP2AP11388 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOP2AP11388 AP005435.3-201ENST00000531260 3198 ntBASIC7.8□□□□□ -1.16
TOP2AP11388 CYP1D1P-201ENST00000416662 1433 ntBASIC7.79□□□□□ -1.16
TOP2AP11388 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC7.79□□□□□ -1.16
TOP2AP11388 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TOP2AP11388 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.79□□□□□ -1.16
TOP2AP11388 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.79□□□□□ -1.16
TOP2AP11388 AL157831.1-201ENST00000426134 473 ntBASIC7.79□□□□□ -1.16
TOP2AP11388 AC006326.1-201ENST00000445465 787 ntBASIC7.79□□□□□ -1.16
TOP2AP11388 VN1R105P-201ENST00000486595 910 ntBASIC7.79□□□□□ -1.16
TOP2AP11388 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.79□□□□□ -1.16
TOP2AP11388 BNIP3P22-201ENST00000593399 556 ntBASIC7.79□□□□□ -1.16
TOP2AP11388 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TOP2AP11388 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
TOP2AP11388 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TOP2AP11388 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TOP2AP11388 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TOP2AP11388 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.78□□□□□ -1.16
TOP2AP11388 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TOP2AP11388 YY1P1-201ENST00000427625 668 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.78□□□□□ -1.16
TOP2AP11388 AC009963.4-201ENST00000448535 339 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
TOP2AP11388 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.78□□□□□ -1.16
TOP2AP11388 FAM27D1-201ENST00000612308 341 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TOP2AP11388 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms