Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.59□□□□□ -1.52
TOP1P11387 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TOP1P11387 AC010928.1-201ENST00000592477 1447 ntBASIC5.58□□□□□ -1.52
TOP1P11387 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TOP1P11387 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.58□□□□□ -1.52
TOP1P11387 AC079741.1-201ENST00000321498 212 ntBASIC5.58□□□□□ -1.52
TOP1P11387 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP1P11387 RNA5SP296-201ENST00000410523 111 ntBASIC5.58□□□□□ -1.52
TOP1P11387 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.58□□□□□ -1.52
TOP1P11387 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.58□□□□□ -1.52
TOP1P11387 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP1P11387 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP1P11387 FABP7P1-201ENST00000424004 391 ntBASIC5.58□□□□□ -1.52
TOP1P11387 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP1P11387 AC010326.1-201ENST00000462726 602 ntBASIC5.58□□□□□ -1.52
TOP1P11387 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP1P11387 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP1P11387 RN7SKP46-201ENST00000515942 234 ntBASIC5.58□□□□□ -1.52
TOP1P11387 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP1P11387 AP006289.1-201ENST00000538089 277 ntBASIC5.58□□□□□ -1.52
TOP1P11387 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP1P11387 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP1P11387 AC234775.3-201ENST00000564612 656 ntBASIC5.58□□□□□ -1.52
TOP1P11387 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.58□□□□□ -1.52
TOP1P11387 AL136295.6-201ENST00000610486 658 ntBASIC5.58□□□□□ -1.52
TOP1P11387 MIR7703-201ENST00000620784 77 ntBASIC5.58□□□□□ -1.52
TOP1P11387 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.58□□□□□ -1.52
TOP1P11387 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP1P11387 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TOP1P11387 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.58□□□□□ -1.52
TOP1P11387 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TOP1P11387 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOP1P11387 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TOP1P11387 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOP1P11387 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOP1P11387 AC107068.1-201ENST00000563286 4218 ntBASIC5.57□□□□□ -1.52
TOP1P11387 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TOP1P11387 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.57□□□□□ -1.52
TOP1P11387 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TOP1P11387 ZFRP1-201ENST00000457579 2970 ntBASIC5.57□□□□□ -1.52
TOP1P11387 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
TOP1P11387 AL590240.1-201ENST00000334118 313 ntBASIC5.57□□□□□ -1.52
TOP1P11387 MIR192-201ENST00000384915 110 ntBASIC5.57□□□□□ -1.52
TOP1P11387 RNU1-82P-201ENST00000390851 165 ntBASIC5.57□□□□□ -1.52
TOP1P11387 RPL26P29-201ENST00000415623 438 ntBASIC5.57□□□□□ -1.52
TOP1P11387 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TOP1P11387 RPS26P4-201ENST00000431743 355 ntBASIC5.57□□□□□ -1.52
TOP1P11387 AL138878.2-201ENST00000440581 1241 ntBASIC5.57□□□□□ -1.52
TOP1P11387 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.57□□□□□ -1.52
TOP1P11387 RPS29P33-201ENST00000456717 146 ntBASIC5.57□□□□□ -1.52
TOP1P11387 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.57□□□□□ -1.52
TOP1P11387 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.57□□□□□ -1.52
TOP1P11387 RNU2-30P-201ENST00000516209 141 ntBASIC5.57□□□□□ -1.52
TOP1P11387 CR383656.6-201ENST00000550518 394 ntBASIC5.57□□□□□ -1.52
TOP1P11387 AL110118.1-201ENST00000553543 400 ntBASIC5.57□□□□□ -1.52
TOP1P11387 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.57□□□□□ -1.52
TOP1P11387 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.57□□□□□ -1.52
TOP1P11387 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.57□□□□□ -1.52
TOP1P11387 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.57□□□□□ -1.52
TOP1P11387 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.57□□□□□ -1.52
TOP1P11387 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.57□□□□□ -1.52
TOP1P11387 MFSD8-216ENST00000641147 4009 ntBASIC5.57□□□□□ -1.52
TOP1P11387 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOP1P11387 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TOP1P11387 RBPJP2-201ENST00000618187 1444 ntBASIC5.57□□□□□ -1.52
TOP1P11387 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOP1P11387 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.56□□□□□ -1.52
TOP1P11387 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TOP1P11387 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.56□□□□□ -1.52
TOP1P11387 DDX18P5-201ENST00000534547 1306 ntBASIC5.56□□□□□ -1.52
TOP1P11387 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TOP1P11387 RPS16P5-201ENST00000406501 404 ntBASIC5.56□□□□□ -1.52
TOP1P11387 VN1R31P-201ENST00000417498 730 ntBASIC5.56□□□□□ -1.52
TOP1P11387 TMBIM7P-201ENST00000418074 855 ntBASIC5.56□□□□□ -1.52
TOP1P11387 RPA2P2-201ENST00000419698 796 ntBASIC5.56□□□□□ -1.52
TOP1P11387 GLUD1P9-201ENST00000420997 1173 ntBASIC5.56□□□□□ -1.52
TOP1P11387 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.56□□□□□ -1.52
TOP1P11387 HMGB3P10-201ENST00000434734 572 ntBASIC5.56□□□□□ -1.52
TOP1P11387 AC112206.1-201ENST00000468416 477 ntBASIC5.56□□□□□ -1.52
TOP1P11387 RPL12P20-201ENST00000475538 479 ntBASIC5.56□□□□□ -1.52
TOP1P11387 AC008897.1-201ENST00000494006 347 ntBASIC5.56□□□□□ -1.52
TOP1P11387 RNA5SP228-201ENST00000516232 133 ntBASIC5.56□□□□□ -1.52
TOP1P11387 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.56□□□□□ -1.52
TOP1P11387 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TOP1P11387 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.56□□□□□ -1.52
TOP1P11387 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.56□□□□□ -1.52
TOP1P11387 AL390726.5-202ENST00000564800 256 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms