Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.19□□□□□ -1.58
TPM1P09493 OR52B5P-202ENST00000641118 1110 ntBASIC5.19□□□□□ -1.58
TPM1P09493 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TPM1P09493 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TPM1P09493 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.18□□□□□ -1.58
TPM1P09493 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM1P09493 AL450326.2-201ENST00000421913 1962 ntBASIC5.18□□□□□ -1.58
TPM1P09493 VPS35P1-201ENST00000563400 1518 ntBASIC5.18□□□□□ -1.58
TPM1P09493 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM1P09493 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM1P09493 A2MP1-204ENST00000566278 4130 ntBASIC5.18□□□□□ -1.58
TPM1P09493 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.18□□□□□ -1.58
TPM1P09493 AC098592.2-201ENST00000413158 265 ntBASIC5.18□□□□□ -1.58
TPM1P09493 LINC00993-201ENST00000420453 540 ntBASIC5.18□□□□□ -1.58
TPM1P09493 RPS12P5-201ENST00000423449 371 ntBASIC5.18□□□□□ -1.58
TPM1P09493 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.18□□□□□ -1.58
TPM1P09493 DYNLL1P7-201ENST00000429273 258 ntBASIC5.18□□□□□ -1.58
TPM1P09493 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.18□□□□□ -1.58
TPM1P09493 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.18□□□□□ -1.58
TPM1P09493 RPS29P14-201ENST00000431518 171 ntBASIC5.18□□□□□ -1.58
TPM1P09493 CFL1P1-202ENST00000432948 411 ntBASIC5.18□□□□□ -1.58
TPM1P09493 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.18□□□□□ -1.58
TPM1P09493 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.18□□□□□ -1.58
TPM1P09493 AL163193.1-201ENST00000444895 788 ntBASIC5.18□□□□□ -1.58
TPM1P09493 SLC25A18P1-201ENST00000449385 454 ntBASIC5.18□□□□□ -1.58
TPM1P09493 OR52Y1P-201ENST00000452418 828 ntBASIC5.18□□□□□ -1.58
TPM1P09493 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM1P09493 ATP5G1P3-201ENST00000463301 410 ntBASIC5.18□□□□□ -1.58
TPM1P09493 RN7SL809P-201ENST00000482040 297 ntBASIC5.18□□□□□ -1.58
TPM1P09493 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM1P09493 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM1P09493 RNA5SP362-201ENST00000516048 118 ntBASIC5.18□□□□□ -1.58
TPM1P09493 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.18□□□□□ -1.58
TPM1P09493 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TPM1P09493 SULT1C2P2-201ENST00000562517 294 ntBASIC5.18□□□□□ -1.58
TPM1P09493 AC027455.1-201ENST00000574104 594 ntBASIC5.18□□□□□ -1.58
TPM1P09493 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM1P09493 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM1P09493 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM1P09493 AC008966.2-201ENST00000606157 453 ntBASIC5.18□□□□□ -1.58
TPM1P09493 AC067931.1-201ENST00000624190 671 ntBASIC5.18□□□□□ -1.58
TPM1P09493 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM1P09493 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
TPM1P09493 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM1P09493 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM1P09493 AC099654.2-201ENST00000433031 1980 ntBASIC5.18□□□□□ -1.58
TPM1P09493 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM1P09493 AL355852.1-201ENST00000454081 1771 ntBASIC5.17□□□□□ -1.58
TPM1P09493 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TPM1P09493 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM1P09493 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM1P09493 AL589647.1-201ENST00000402485 466 ntBASIC5.17□□□□□ -1.58
TPM1P09493 ARL4AP5-201ENST00000404372 599 ntBASIC5.17□□□□□ -1.58
TPM1P09493 DPPA2P3-201ENST00000411853 655 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.17□□□□□ -1.58
TPM1P09493 RPL7P57-201ENST00000423238 740 ntBASIC5.17□□□□□ -1.58
TPM1P09493 Z74021.1-201ENST00000423610 407 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.17□□□□□ -1.58
TPM1P09493 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.17□□□□□ -1.58
TPM1P09493 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.17□□□□□ -1.58
TPM1P09493 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.17□□□□□ -1.58
TPM1P09493 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.17□□□□□ -1.58
TPM1P09493 AC025445.1-201ENST00000502728 300 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AC024558.1-201ENST00000505008 528 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.17□□□□□ -1.58
TPM1P09493 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.17□□□□□ -1.58
TPM1P09493 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AC004825.1-201ENST00000555068 586 ntBASIC5.17□□□□□ -1.58
TPM1P09493 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.17□□□□□ -1.58
TPM1P09493 AC093249.4-201ENST00000564755 259 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AL713998.2-201ENST00000604538 1198 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AL512329.2-201ENST00000607350 548 ntBASIC5.17□□□□□ -1.58
TPM1P09493 AC023813.4-201ENST00000607580 580 ntBASIC5.17□□□□□ -1.58
TPM1P09493 CR381572.2-201ENST00000624852 397 ntBASIC5.17□□□□□ -1.58
TPM1P09493 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TPM1P09493 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TPM1P09493 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TPM1P09493 AC018529.3-201ENST00000624212 2254 ntBASIC5.17□□□□□ -1.58
TPM1P09493 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TPM1P09493 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM1P09493 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TPM1P09493 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TPM1P09493 MAPK10-263ENST00000641052 4307 ntBASIC5.16□□□□□ -1.58
TPM1P09493 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TPM1P09493 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
TPM1P09493 RNA5SP428-201ENST00000365129 132 ntBASIC5.16□□□□□ -1.58
TPM1P09493 OR13C3-201ENST00000374781 1108 ntBASIC5.16□□□□□ -1.58
TPM1P09493 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TPM1P09493 U3.36-201ENST00000408418 213 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM1P09493 NPM1P4-201ENST00000414095 812 ntBASIC5.16□□□□□ -1.58
TPM1P09493 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM1P09493 AL121776.1-201ENST00000429337 372 ntBASIC5.16□□□□□ -1.58
TPM1P09493 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM1P09493 FAR2P1-206ENST00000449736 709 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms