Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC010857.1-201ENST00000606398 594 ntBASIC5□□□□□ -1.61
RETP07949 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
RETP07949 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5□□□□□ -1.61
RETP07949 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5□□□□□ -1.61
RETP07949 MTCO1P22-201ENST00000604619 1360 ntBASIC5□□□□□ -1.61
RETP07949 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RETP07949 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
RETP07949 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
RETP07949 DDX18P3-201ENST00000404856 2007 ntBASIC4.99□□□□□ -1.61
RETP07949 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RETP07949 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RETP07949 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 AC120338.1-201ENST00000625074 1541 ntBASIC4.99□□□□□ -1.61
RETP07949 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RETP07949 AL731532.2-201ENST00000623542 1953 ntBASIC4.99□□□□□ -1.61
RETP07949 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 IGKV7-3-201ENST00000357453 298 ntBASIC4.99□□□□□ -1.61
RETP07949 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 ELOCP19-201ENST00000411919 318 ntBASIC4.99□□□□□ -1.61
RETP07949 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 NRBF2P3-201ENST00000432731 865 ntBASIC4.99□□□□□ -1.61
RETP07949 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.99□□□□□ -1.61
RETP07949 NOP56P2-201ENST00000447491 769 ntBASIC4.99□□□□□ -1.61
RETP07949 SLC25A18P1-201ENST00000449385 454 ntBASIC4.99□□□□□ -1.61
RETP07949 BX842559.2-201ENST00000451418 605 ntBASIC4.99□□□□□ -1.61
RETP07949 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.99□□□□□ -1.61
RETP07949 RPL21P129-201ENST00000491732 478 ntBASIC4.99□□□□□ -1.61
RETP07949 RN7SL604P-201ENST00000492589 296 ntBASIC4.99□□□□□ -1.61
RETP07949 NIFKP7-201ENST00000503365 834 ntBASIC4.99□□□□□ -1.61
RETP07949 KATNBL1P4-201ENST00000503545 918 ntBASIC4.99□□□□□ -1.61
RETP07949 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.99□□□□□ -1.61
RETP07949 AC010350.1-201ENST00000504908 231 ntBASIC4.99□□□□□ -1.61
RETP07949 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.99□□□□□ -1.61
RETP07949 AC026402.1-201ENST00000513642 170 ntBASIC4.99□□□□□ -1.61
RETP07949 SOX5P1-201ENST00000524155 1127 ntBASIC4.99□□□□□ -1.61
RETP07949 MORF4L1P3-201ENST00000525966 950 ntBASIC4.99□□□□□ -1.61
RETP07949 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.99□□□□□ -1.61
RETP07949 AL109766.1-201ENST00000555080 552 ntBASIC4.99□□□□□ -1.61
RETP07949 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.99□□□□□ -1.61
RETP07949 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 CCDC58P3-201ENST00000590792 430 ntBASIC4.99□□□□□ -1.61
RETP07949 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.99□□□□□ -1.61
RETP07949 AC020910.3-201ENST00000603701 874 ntBASIC4.99□□□□□ -1.61
RETP07949 MIR6716-201ENST00000613413 80 ntBASIC4.99□□□□□ -1.61
RETP07949 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 MTCO1P1-201ENST00000624263 1081 ntBASIC4.99□□□□□ -1.61
RETP07949 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.99□□□□□ -1.61
RETP07949 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 AC000374.1-201ENST00000434698 1745 ntBASIC4.99□□□□□ -1.61
RETP07949 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RETP07949 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.99□□□□□ -1.61
RETP07949 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RETP07949 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RETP07949 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RETP07949 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.98□□□□□ -1.61
RETP07949 AC112198.2-201ENST00000426589 6996 ntBASIC4.98□□□□□ -1.61
RETP07949 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.98□□□□□ -1.61
RETP07949 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RETP07949 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RETP07949 RNU4-39P-201ENST00000362455 127 ntBASIC4.98□□□□□ -1.61
RETP07949 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.98□□□□□ -1.61
RETP07949 RNU1-74P-201ENST00000384108 171 ntBASIC4.98□□□□□ -1.61
RETP07949 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RETP07949 RN7SKP16-201ENST00000410180 299 ntBASIC4.98□□□□□ -1.61
RETP07949 RN7SKP263-201ENST00000411194 309 ntBASIC4.98□□□□□ -1.61
RETP07949 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.98□□□□□ -1.61
RETP07949 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.98□□□□□ -1.61
RETP07949 AL592293.2-201ENST00000422292 996 ntBASIC4.98□□□□□ -1.61
RETP07949 RPL23AP1-201ENST00000428990 471 ntBASIC4.98□□□□□ -1.61
RETP07949 AC005154.2-201ENST00000438110 379 ntBASIC4.98□□□□□ -1.61
RETP07949 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.98□□□□□ -1.61
RETP07949 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.98□□□□□ -1.61
RETP07949 IGHV5-78-201ENST00000450948 295 ntBASIC4.98□□□□□ -1.61
RETP07949 AURKAPS2-201ENST00000454983 333 ntBASIC4.98□□□□□ -1.61
RETP07949 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.98□□□□□ -1.61
RETP07949 RPL12P20-201ENST00000475538 479 ntBASIC4.98□□□□□ -1.61
RETP07949 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.98□□□□□ -1.61
RETP07949 RNA5SP464-201ENST00000516251 108 ntBASIC4.98□□□□□ -1.61
RETP07949 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.98□□□□□ -1.61
RETP07949 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RETP07949 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.98□□□□□ -1.61
RETP07949 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.98□□□□□ -1.61
RETP07949 AC007066.2-202ENST00000566531 914 ntBASIC4.98□□□□□ -1.61
RETP07949 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.98□□□□□ -1.61
RETP07949 AC096553.1-201ENST00000605169 829 ntBASIC4.98□□□□□ -1.61
RETP07949 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.98□□□□□ -1.61
RETP07949 AC010809.3-201ENST00000621310 641 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms