Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 NR1H5P-201ENST00000452683 1377 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC125257.1-201ENST00000560400 2930 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 RAD23BP1-201ENST00000421404 1227 ntBASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AC087283.1-201ENST00000604029 1074 ntBASIC4.61□□□□□ -1.67
HLA-DQB2P05538 SNORD91B-202ENST00000608459 222 ntBASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AC021106.3-201ENST00000623925 531 ntBASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AC016542.2-201ENST00000624201 619 ntBASIC4.61□□□□□ -1.67
HLA-DQB2P05538 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 CPHL1P-201ENST00000461341 3407 ntBASIC4.61□□□□□ -1.67
HLA-DQB2P05538 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 AP001002.1-201ENST00000625148 1513 ntBASIC4.61□□□□□ -1.67
HLA-DQB2P05538 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQB2P05538 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC079741.1-201ENST00000321498 212 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 CYB5AP4-201ENST00000396692 399 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 FCF1P5-201ENST00000406490 482 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AL590139.1-201ENST00000416267 400 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC069213.2-201ENST00000420238 366 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 RPS12P10-201ENST00000427031 377 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AP001324.1-201ENST00000428553 399 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 PPIAP13-201ENST00000434706 478 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC011753.3-201ENST00000443436 406 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 ATP5G1P3-201ENST00000463301 410 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC008897.1-201ENST00000494006 347 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC063949.1-201ENST00000552900 865 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC006272.2-201ENST00000594725 163 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC103792.1-201ENST00000603591 919 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC008966.2-201ENST00000606157 453 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 OR2L1P-202ENST00000641567 1023 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 MFSD8-216ENST00000641147 4009 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 LINC00622-201ENST00000562811 1570 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 AC139769.1-204ENST00000472297 1931 ntBASIC4.6□□□□□ -1.67
HLA-DQB2P05538 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQB2P05538 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC093591.2-201ENST00000565254 3843 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 MAPK10-303ENST00000641324 3959 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 RNA5SP505-201ENST00000364748 108 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 RNU1-63P-201ENST00000383902 164 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 RN7SKP97-201ENST00000410966 333 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 FTLP19-201ENST00000433300 394 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 SBDSP1-204ENST00000453858 737 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 RPL23AP72-201ENST00000492447 435 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 UGT2B26P-201ENST00000508672 1613 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms