Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.79□□□□□ -1.64
CLPTM1O96005 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 CYCSP40-201ENST00000575927 294 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 ABI1P1-201ENST00000603375 1120 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 KATNBL1P5-201ENST00000605015 517 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 CR589904.2-201ENST00000612533 440 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AL163051.2-201ENST00000618976 735 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 VN2R3P-201ENST00000422626 1412 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.79□□□□□ -1.64
CLPTM1O96005 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.79□□□□□ -1.64
CLPTM1O96005 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLPTM1O96005 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLPTM1O96005 MTND4P9-201ENST00000507819 1346 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
CLPTM1O96005 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLPTM1O96005 RN7SKP124-201ENST00000364730 341 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 NCSTNP1-201ENST00000406229 144 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AL390316.1-201ENST00000406279 553 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.78□□□□□ -1.64
CLPTM1O96005 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 AC079355.1-201ENST00000421770 223 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AL121882.1-201ENST00000422893 417 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 CKS1BP6-201ENST00000424932 240 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.78□□□□□ -1.64
CLPTM1O96005 RPL12P17-201ENST00000432393 498 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 NMNAT1P2-201ENST00000435192 860 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AL138787.1-202ENST00000437804 898 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 AC007000.2-201ENST00000442564 487 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.78□□□□□ -1.64
CLPTM1O96005 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.78□□□□□ -1.64
CLPTM1O96005 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.78□□□□□ -1.64
CLPTM1O96005 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AC022431.1-201ENST00000450941 438 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.78□□□□□ -1.64
CLPTM1O96005 OR2AF1P-201ENST00000454899 889 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AC108161.1-201ENST00000461060 402 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 AL136038.1-201ENST00000497246 351 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.78□□□□□ -1.64
CLPTM1O96005 snoU109.6-201ENST00000516831 118 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 VTA1P2-201ENST00000520205 911 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 GSTP1P1-201ENST00000548078 319 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.78□□□□□ -1.64
CLPTM1O96005 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.78□□□□□ -1.64
CLPTM1O96005 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 RN7SL708P-201ENST00000580952 299 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 ZNF92P2-201ENST00000600543 1059 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.78□□□□□ -1.64
CLPTM1O96005 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 AC120053.1-201ENST00000607706 736 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 AC132068.1-201ENST00000623805 459 ntBASIC4.78□□□□□ -1.64
CLPTM1O96005 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.78□□□□□ -1.64
CLPTM1O96005 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.78□□□□□ -1.64
CLPTM1O96005 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLPTM1O96005 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLPTM1O96005 AC007382.1-201ENST00000624376 2618 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLPTM1O96005 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLPTM1O96005 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLPTM1O96005 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLPTM1O96005 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLPTM1O96005 OR52B1P-201ENST00000316506 909 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 SNORA63.3-201ENST00000362682 132 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 RNA5SP28-201ENST00000363841 119 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 SNORD115-48-201ENST00000364764 76 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLPTM1O96005 MIR620-201ENST00000385232 95 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 U3.25-201ENST00000391209 220 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 RPL21P108-201ENST00000413857 481 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLPTM1O96005 AL139148.1-201ENST00000427122 680 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 MTCO1P51-201ENST00000427672 1060 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 AL121776.1-201ENST00000429337 372 ntBASIC4.77□□□□□ -1.65
CLPTM1O96005 AC009238.2-201ENST00000431026 355 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms