Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RNU6-891P-201ENST00000384280 111 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 RNA5SP113-201ENST00000410486 84 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 EIF4A1P1-201ENST00000420241 934 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 RPL7P57-201ENST00000423238 740 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 HMGB1P32-201ENST00000425971 565 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 HMGB3P10-201ENST00000434734 572 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 RPL31P53-201ENST00000457065 348 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 RPL35AP28-201ENST00000459730 331 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 AL591473.1-201ENST00000464297 313 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.25□□□□□ -1.57
UBE4BO95155 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.25□□□□□ -1.57
UBE4BO95155 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.25□□□□□ -1.57
UBE4BO95155 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.25□□□□□ -1.57
UBE4BO95155 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.25□□□□□ -1.57
UBE4BO95155 MIR4436B2-201ENST00000581415 91 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 MIR4436B1-201ENST00000583272 91 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.25□□□□□ -1.57
UBE4BO95155 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.25□□□□□ -1.57
UBE4BO95155 FAM60CP-201ENST00000591086 664 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 AC005084.1-201ENST00000605160 304 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.25□□□□□ -1.57
UBE4BO95155 AL135786.2-201ENST00000608422 615 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 FAM27B-201ENST00000610601 213 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 AC015922.4-201ENST00000612568 690 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.25□□□□□ -1.57
UBE4BO95155 AC105105.5-201ENST00000622635 1294 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UBE4BO95155 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UBE4BO95155 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
UBE4BO95155 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.25□□□□□ -1.57
UBE4BO95155 AP000542.2-201ENST00000623199 6179 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
UBE4BO95155 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
UBE4BO95155 AC093591.2-201ENST00000565254 3843 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 IRF5P1-201ENST00000504852 2164 ntBASIC5.25□□□□□ -1.57
UBE4BO95155 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.24□□□□□ -1.57
UBE4BO95155 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.24□□□□□ -1.57
UBE4BO95155 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 FABP7P2-201ENST00000429946 379 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 AC004938.1-201ENST00000438468 308 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 AC010733.1-201ENST00000451515 401 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.24□□□□□ -1.57
UBE4BO95155 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.24□□□□□ -1.57
UBE4BO95155 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.24□□□□□ -1.57
UBE4BO95155 FKBP1BP1-201ENST00000553366 325 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.24□□□□□ -1.57
UBE4BO95155 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.24□□□□□ -1.57
UBE4BO95155 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
UBE4BO95155 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.24□□□□□ -1.57
UBE4BO95155 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 AC015722.2-201ENST00000622210 551 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 AC006840.1-201ENST00000623069 542 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 AP001784.1-201ENST00000624107 428 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
UBE4BO95155 AL445487.1-201ENST00000415694 1580 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.24□□□□□ -1.57
UBE4BO95155 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
UBE4BO95155 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
UBE4BO95155 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBE4BO95155 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
UBE4BO95155 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UBE4BO95155 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBE4BO95155 AL590762.2-201ENST00000395798 571 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 RN7SKP100-201ENST00000411258 284 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 AL139128.1-201ENST00000413921 941 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 TRIM60P17-201ENST00000415181 719 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBE4BO95155 AL392003.1-201ENST00000434394 243 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 CYCSP11-201ENST00000436426 315 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE4BO95155 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE4BO95155 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.23□□□□□ -1.57
UBE4BO95155 AL356390.1-201ENST00000455684 397 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.23□□□□□ -1.57
UBE4BO95155 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBE4BO95155 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE4BO95155 AP000859.1-201ENST00000525536 307 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 AC087477.6-201ENST00000559595 843 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 AC125257.1-201ENST00000560400 2930 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 AC122134.1-201ENST00000565664 1104 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 MIR3667-201ENST00000581025 74 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.23□□□□□ -1.57
UBE4BO95155 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.23□□□□□ -1.57
UBE4BO95155 AC133644.2-201ENST00000608142 540 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 AL592494.3-201ENST00000609485 464 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 AL442639.1-201ENST00000625030 1899 ntBASIC5.23□□□□□ -1.57
UBE4BO95155 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms