Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 OR51A6P-201ENST00000418680 1004 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN3O15551 AL645608.4-201ENST00000423619 154 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN3O15551 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN3O15551 C1DP3-201ENST00000455013 423 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN3O15551 AC011005.3-201ENST00000491624 395 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 RPS27AP18-201ENST00000515536 459 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 IGKV1-32-201ENST00000519290 311 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN3O15551 AC093249.4-201ENST00000564755 259 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.22□□□□□ -1.57
CLDN3O15551 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLDN3O15551 AC007382.1-201ENST00000624376 2618 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN3O15551 AC093775.1-201ENST00000624154 1868 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 AL442639.1-201ENST00000625030 1899 ntBASIC5.22□□□□□ -1.57
CLDN3O15551 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN3O15551 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN3O15551 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.21□□□□□ -1.57
CLDN3O15551 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.21□□□□□ -1.57
CLDN3O15551 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN3O15551 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN3O15551 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLDN3O15551 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN3O15551 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN3O15551 AL591623.2-201ENST00000449978 222 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 HSPE1P22-201ENST00000456856 327 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AC006967.1-201ENST00000467608 589 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 IGLV2-34-201ENST00000490007 283 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN3O15551 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN3O15551 AC073358.1-201ENST00000505671 684 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AC091868.1-201ENST00000508746 304 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.21□□□□□ -1.58
CLDN3O15551 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN3O15551 RNU6-319P-201ENST00000516025 108 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 RNA5SP249-201ENST00000516127 99 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.21□□□□□ -1.58
CLDN3O15551 OR8A2P-201ENST00000528631 952 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN3O15551 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN3O15551 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN3O15551 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN3O15551 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN3O15551 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN3O15551 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN3O15551 AC009303.3-201ENST00000591103 736 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN3O15551 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN3O15551 AL592494.3-201ENST00000609485 464 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 MIR6853-201ENST00000619642 74 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AC105105.5-201ENST00000622635 1294 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AC073342.3-201ENST00000624211 193 ntBASIC5.21□□□□□ -1.58
CLDN3O15551 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN3O15551 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLDN3O15551 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN3O15551 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN3O15551 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN3O15551 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN3O15551 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN3O15551 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN3O15551 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN3O15551 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN3O15551 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN3O15551 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN3O15551 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN3O15551 MIR298-201ENST00000401212 88 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN3O15551 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN3O15551 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 RGS17P1-201ENST00000423358 553 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 AC016831.4-201ENST00000438302 307 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 RAB28P3-201ENST00000448325 597 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN3O15551 AC090686.1-201ENST00000481577 749 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 OR9N1P-201ENST00000491296 333 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN3O15551 OR10D4P-201ENST00000525892 951 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN3O15551 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN3O15551 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN3O15551 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN3O15551 CYCSP40-201ENST00000575927 294 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN3O15551 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN3O15551 FAM60CP-201ENST00000591086 664 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 AC098935.2-201ENST00000604222 466 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 GMCL1P2-201ENST00000605230 823 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 AL161616.1-201ENST00000611867 286 ntBASIC5.2□□□□□ -1.58
CLDN3O15551 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN3O15551 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN3O15551 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN3O15551 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLDN3O15551 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN3O15551 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN3O15551 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN3O15551 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms