Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.12□□□□□ -1.91
NDUFA1O15239 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.12□□□□□ -1.91
NDUFA1O15239 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC090142.1-201ENST00000465776 462 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 AC092905.1-201ENST00000467527 949 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 RN7SL101P-201ENST00000496350 279 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC098799.3-201ENST00000506095 438 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.12□□□□□ -1.91
NDUFA1O15239 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDUFA1O15239 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC107993.1-201ENST00000591343 684 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AL031666.3-201ENST00000609320 1006 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 AC241377.1-201ENST00000619797 406 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 AC103858.2-201ENST00000621471 543 ntBASIC3.12□□□□□ -1.91
NDUFA1O15239 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDUFA1O15239 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDUFA1O15239 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
NDUFA1O15239 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.12□□□□□ -1.91
NDUFA1O15239 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NDUFA1O15239 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NDUFA1O15239 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDUFA1O15239 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.12□□□□□ -1.91
NDUFA1O15239 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NDUFA1O15239 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 MFSD8-242ENST00000641690 4199 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NDUFA1O15239 RNA5SP151-201ENST00000365632 117 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 BMS1P3-201ENST00000372011 932 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 RN7SKP206-201ENST00000410823 293 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 TRIM60P17-201ENST00000415181 719 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC093162.1-201ENST00000419682 124 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.11□□□□□ -1.91
NDUFA1O15239 RPL7P11-201ENST00000437586 658 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC104306.1-201ENST00000449702 371 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AL451050.1-201ENST00000450126 415 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 RPS5P7-201ENST00000456664 608 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 UBA52P7-201ENST00000486088 380 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 HNRNPKP5-201ENST00000515300 253 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 IGLV2-28-201ENST00000520681 304 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.11□□□□□ -1.91
NDUFA1O15239 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 UBTFL9-201ENST00000534504 1148 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC3.11□□□□□ -1.91
NDUFA1O15239 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.11□□□□□ -1.91
NDUFA1O15239 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 OR11J2P-201ENST00000555298 907 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 RN7SL802P-201ENST00000577858 299 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 MIR5699-201ENST00000578903 90 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.11□□□□□ -1.91
NDUFA1O15239 AC022726.1-201ENST00000587475 207 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC011487.3-201ENST00000593607 453 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 AC020910.3-201ENST00000603701 874 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC073137.1-201ENST00000605636 634 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AL008729.2-201ENST00000606393 473 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AL133406.3-201ENST00000606817 541 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AP002360.3-201ENST00000607673 710 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC020634.1-201ENST00000608701 549 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 AC007497.1-201ENST00000610421 561 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 FAM27B-201ENST00000610601 213 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 AC091905.4-201ENST00000623432 202 ntBASIC3.11□□□□□ -1.91
NDUFA1O15239 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms