Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AP000473.2-201ENST00000602659 1537 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC083843.2-201ENST00000568248 6253 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
FOXN3O00409 RNU1-19P-201ENST00000363306 165 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 RN7SKP15-201ENST00000364742 309 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 RN7SKP69-201ENST00000365390 305 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 Y_RNA.578-201ENST00000390903 88 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 RPL23AP59-201ENST00000399415 461 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 RN7SKP286-201ENST00000410894 299 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 TCEA1P4-201ENST00000415066 844 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AC104843.2-201ENST00000427666 297 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AC124944.2-201ENST00000429866 1242 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXN3O00409 RPL5P25-201ENST00000441148 775 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 SEPT14P24-201ENST00000447236 180 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 NOP56P2-201ENST00000447491 769 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 RN7SL51P-201ENST00000468230 285 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AC093720.1-201ENST00000505681 714 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 RFPL4AP5-201ENST00000514977 504 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 MORF4L1P3-201ENST00000525966 950 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXN3O00409 AC027369.5-201ENST00000533838 755 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AC027544.3-201ENST00000535082 757 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AC006518.2-201ENST00000542513 940 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXN3O00409 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXN3O00409 AC005341.1-201ENST00000571086 708 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 ZNF92P3-201ENST00000596594 954 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 RNU4-5P-201ENST00000607255 135 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXN3O00409 FRG1HP-204ENST00000617940 757 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AL121890.3-201ENST00000618494 516 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXN3O00409 AC103703.1-201ENST00000634783 663 ntBASIC5.73□□□□□ -1.49
FOXN3O00409 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
FOXN3O00409 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
FOXN3O00409 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXN3O00409 AC005005.4-201ENST00000623789 16698 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 BTBD10P1-201ENST00000549824 1352 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 RNA5SP335-201ENST00000363817 110 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 SNORA48.4-201ENST00000391089 134 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 MIR1303-201ENST00000408625 86 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 BTF3P8-201ENST00000414577 526 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 LIPT1P1-201ENST00000415870 1186 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 GAPDHP25-201ENST00000447061 1001 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 CBX1P2-201ENST00000453841 458 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms