Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC108120.2-201ENST00000512973 294 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC098976.1-201ENST00000513014 541 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 BRD9P1-201ENST00000529855 560 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AL512310.9-201ENST00000553311 948 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC027216.1-201ENST00000577726 685 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 MIR4480-201ENST00000582492 71 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC011626.1-201ENST00000604710 562 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC007423.1-201ENST00000605009 627 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 MIR6839-201ENST00000620425 113 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NPIPA3F8WFD2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL512283.1-201ENST00000606756 1384 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CASC19-221ENST00000641309 1382 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 RN7SKP115-201ENST00000363177 317 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL035419.1-201ENST00000397037 564 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 RN7SKP222-201ENST00000410651 315 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC104837.2-201ENST00000427236 424 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 HMGB1P5-202ENST00000451497 985 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 RPS3AP41-201ENST00000462701 778 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC107398.1-201ENST00000486904 505 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 RN7SL814P-201ENST00000487715 300 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 RNU6-1102P-201ENST00000516149 96 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 SNORA26.10-201ENST00000516427 141 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CDH12P4-201ENST00000517835 295 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CDH12P3-201ENST00000517935 295 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CDH12P1-201ENST00000518435 295 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 OR5AZ1P-201ENST00000527448 943 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AP003049.1-201ENST00000529418 457 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 PCNPP1-201ENST00000552501 511 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CD24P2-201ENST00000565486 219 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC011487.3-201ENST00000593607 453 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 SUMO2P14-201ENST00000604488 293 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 MIR6748-201ENST00000610433 71 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AL445493.3-201ENST00000619568 477 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms