Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 AC025588.2-201ENST00000604851 466 ntBASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 PART1_2.1-201ENST00000612397 250 ntBASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 AC022467.1-201ENST00000614738 749 ntBASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 AC104985.3-201ENST00000623479 597 ntBASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 AC093909.5-201ENST00000621839 1799 ntBASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 SNORD56.4-201ENST00000363883 71 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 RNU6-1005P-201ENST00000384519 107 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 USP9YP21-201ENST00000420603 432 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 HMGN2P27-201ENST00000427352 270 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 TXNL1P1-201ENST00000429528 554 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 ZNF886P-201ENST00000450781 723 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 Z95152.1-201ENST00000453556 656 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC009127.1-201ENST00000467090 155 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 NDUFA5P9-201ENST00000472609 340 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 BX284632.1-201ENST00000478218 541 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 CR383656.1-201ENST00000484916 377 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 RN7SL441P-201ENST00000492388 296 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC026414.1-201ENST00000504046 698 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC007834.2-201ENST00000536310 343 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC125611.1-201ENST00000549563 229 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 OR11J2P-201ENST00000555298 907 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC069304.3-201ENST00000603938 1084 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 Z94722.1-201ENST00000604328 474 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 SUMO2P14-201ENST00000604488 293 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AL512329.2-201ENST00000607350 548 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 MIR6768-201ENST00000610734 72 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV5S1A1TA0A578 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 AL360270.2-201ENST00000562952 5985 ntBASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 SNORA17.1-201ENST00000362945 126 ntBASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV5S1A1TA0A578 SNORA2.3-201ENST00000383920 135 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 286.3 ms