Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MTHFD2P2-201ENST00000407725 247 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 SNORA77-201ENST00000408716 125 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AL356273.2-201ENST00000413701 973 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC007390.1-201ENST00000415722 356 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 RPL18AP14-201ENST00000417685 526 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AK4P4-201ENST00000419465 646 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 RPS15AP6-201ENST00000420703 385 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 SRSF1P1-201ENST00000424058 520 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 CDY14P-201ENST00000431260 1014 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 CHCHD4P5-201ENST00000436684 427 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 MTCYBP31-201ENST00000438855 1122 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 CDY12P-201ENST00000440679 1015 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 TXNP1-201ENST00000441872 371 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 CDY13P-201ENST00000445813 1015 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 FAR2P1-206ENST00000449736 709 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 CDY23P-201ENST00000451661 1014 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 ST13P21-201ENST00000453250 1098 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 YRDCP3-201ENST00000456507 480 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC010468.1-201ENST00000461022 817 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 RN7SL308P-201ENST00000464971 297 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 RPS27AP16-201ENST00000492222 470 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 PRMT5P1-201ENST00000514351 598 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC135983.3-201ENST00000528049 1226 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC036111.2-201ENST00000533247 901 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 MIR4716-201ENST00000579628 84 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 MIR4776-2-201ENST00000580204 80 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC005703.4-201ENST00000580422 538 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC068020.1-201ENST00000594215 661 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC011492.1-201ENST00000600023 315 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC011453.2-201ENST00000603737 729 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC010200.2-201ENST00000605098 235 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 TTR-204ENST00000610404 1040 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC099778.2-201ENST00000610904 211 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC013489.3-201ENST00000623274 517 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC133485.6-201ENST00000624045 688 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC004943.3-201ENST00000624116 600 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 FKBP1AP4-201ENST00000631775 336 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC007603.3-201ENST00000636915 979 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 MBD5-221ENST00000637159 902 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC135068.12-201ENST00000637370 931 ntBASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01558Q9Y6Z2 ZNF826P-207ENST00000622273 1910 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 RAD1P1-201ENST00000231383 813 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 RN7SKP115-201ENST00000363177 317 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SNORA70.10-201ENST00000384515 134 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL589647.1-201ENST00000402485 466 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL590704.1-201ENST00000402856 794 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL136131.1-201ENST00000406079 803 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AMZ2P2-201ENST00000406819 1057 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL360013.1-201ENST00000419031 858 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 RAD23BP1-201ENST00000421404 1227 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC069154.1-201ENST00000432914 542 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms