Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ATG4BQ9Y4P1 CASC19-284ENST00000642142 1868 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 GSTA12P-201ENST00000402398 508 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL589655.1-201ENST00000405398 482 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC007738.1-201ENST00000413892 348 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 QRSL1P2-201ENST00000418582 964 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 PSMD10P3-201ENST00000437000 448 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 RPL12P3-201ENST00000440080 396 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC073052.1-201ENST00000440417 714 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL627224.1-201ENST00000448334 444 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC022431.1-201ENST00000450941 438 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 OTX2P1-201ENST00000450956 354 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL513343.1-201ENST00000451818 792 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC093166.2-201ENST00000455969 1017 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC073073.1-201ENST00000493920 463 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC021146.7-201ENST00000509604 775 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 BTG4P1-201ENST00000510421 183 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AP000676.2-201ENST00000529711 301 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 MIR4646-201ENST00000580775 63 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 MEMO1P5-201ENST00000604810 406 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC005377.1-201ENST00000605126 456 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 SAMMSON-213ENST00000641336 1521 ntBASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4BQ9Y4P1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 ECM1P2-201ENST00000503354 1577 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC131971.1-201ENST00000332881 1482 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 PCAT14-202ENST00000627127 3935 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 SNORA73.1-201ENST00000363107 205 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 CHMP1B2P-201ENST00000399581 597 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 RN7SKP125-201ENST00000410481 302 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 NPM1P40-201ENST00000412758 733 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 OR13Z1P-201ENST00000416141 834 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AF186996.5-201ENST00000418098 904 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AL590623.1-201ENST00000427864 105 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 VN1R54P-201ENST00000435210 1049 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 SCAND3P1-201ENST00000439854 1060 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AL137845.2-201ENST00000444292 988 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AL356981.1-201ENST00000454879 684 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 OR52A4P-202ENST00000481634 799 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC110775.1-201ENST00000513721 462 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms