Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 IL6STP1-201ENST00000346911 1020 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 Y_RNA.67-201ENST00000362870 100 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 RN7SKP77-201ENST00000363261 353 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 RNU6-1309P-201ENST00000363305 108 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 RN7SKP275-201ENST00000364626 301 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 U6.112-201ENST00000384129 70 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 RPS3AP23-201ENST00000401762 784 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 BTF3P8-201ENST00000414577 526 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 RNF19BPX-201ENST00000426224 625 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 PFN1P11-201ENST00000445829 389 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 BUD31P2-201ENST00000449374 300 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 RPL26P30-201ENST00000453533 435 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 HMGB1P46-201ENST00000520062 610 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 OR5AN2P-201ENST00000534535 896 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AP000619.3-201ENST00000535634 1127 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 CBX3P5-201ENST00000552017 521 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC026898.1-201ENST00000586404 571 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AL035413.2-201ENST00000604801 525 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 MIR7844-201ENST00000616161 122 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 AC079228.1-201ENST00000624774 1049 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 MIR4278-201ENST00000636094 69 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF37BP-203ENST00000452306 1352 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 MTND5P6-201ENST00000422338 1798 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 SNORA33.2-201ENST00000365413 134 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL451142.1-201ENST00000375867 775 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 MIR188-201ENST00000385034 86 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 NPM1P36-201ENST00000415681 835 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC115283.1-201ENST00000427353 400 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 RPL5P7-201ENST00000444235 813 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 GAPDHP17-201ENST00000449858 1001 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 RN7SL39P-201ENST00000462264 297 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC023245.1-201ENST00000468501 517 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 HMGB1P47-201ENST00000511281 589 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 RN7SKP13-201ENST00000515933 244 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 RNA5SP441-201ENST00000516809 88 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 OR5BN1P-201ENST00000532955 829 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL355375.2-201ENST00000574825 175 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL953862.2-201ENST00000603089 820 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AL445647.2-201ENST00000615170 130 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AC087588.2-201ENST00000617667 426 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms