Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 AC105074.1-201ENST00000623380 3095 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 BCORP1-203ENST00000513194 5093 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 SNORA11F-201ENST00000408237 128 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 SNORA11C-201ENST00000408532 129 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 AL451062.2-201ENST00000427515 271 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 PHBP16-201ENST00000446318 950 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 snoU13.22-201ENST00000459428 104 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 BPIFA4P-203ENST00000603168 689 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 AC025031.4-201ENST00000621248 3271 ntBASIC5.84□□□□□ -1.47
SCN11AQ9UI33 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN11AQ9UI33 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SCN11AQ9UI33 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SCN11AQ9UI33 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
SCN11AQ9UI33 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
SCN11AQ9UI33 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.84□□□□□ -1.48
SCN11AQ9UI33 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 OR5P1P-201ENST00000299512 925 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 MIR133A2-201ENST00000347538 102 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AC011998.1-201ENST00000433403 117 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 BTF3P10-201ENST00000433415 495 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 MTCO1P35-201ENST00000515270 228 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AC106785.1-201ENST00000565935 262 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 EIF2AP4-201ENST00000424793 1781 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 CCAT2-201ENST00000630920 1752 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 RNU1-63P-201ENST00000383902 164 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 RNA5SP187-201ENST00000384400 119 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 EEF1A1P1-201ENST00000447052 739 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 RPL35P6-201ENST00000490024 372 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 RNA5SP230-201ENST00000517039 122 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 MED28P5-201ENST00000528254 438 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AC113403.1-201ENST00000604910 193 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 SNX18P1Y-201ENST00000616231 511 ntBASIC5.83□□□□□ -1.48
SCN11AQ9UI33 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN11AQ9UI33 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 RPL32P23-201ENST00000397237 405 ntBASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AC025750.1-201ENST00000399891 379 ntBASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AC105137.1-201ENST00000484355 562 ntBASIC5.82□□□□□ -1.48
SCN11AQ9UI33 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 AL359922.3-201ENST00000624779 1670 ntBASIC5.82□□□□□ -1.48
SCN11AQ9UI33 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
SCN11AQ9UI33 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 AC011755.1-201ENST00000623763 2049 ntBASIC5.81□□□□□ -1.48
SCN11AQ9UI33 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 RPL23AP26-201ENST00000412728 464 ntBASIC5.81□□□□□ -1.48
SCN11AQ9UI33 COX6CP15-201ENST00000426313 211 ntBASIC5.81□□□□□ -1.48
SCN11AQ9UI33 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN11AQ9UI33 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms