Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 RNU4-2-201ENST00000365668 141 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 HMGB1P10-201ENST00000395823 563 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 LUZP4P1-201ENST00000415420 344 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC007394.1-201ENST00000421941 531 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC010099.3-201ENST00000423896 409 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC093422.3-201ENST00000428506 305 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AL596266.1-201ENST00000448132 400 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC112492.1-201ENST00000449607 712 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 VDAC2P4-201ENST00000452925 711 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 ATP5LP5-201ENST00000483050 299 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC069304.1-201ENST00000491593 704 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 RN7SL591P-201ENST00000496150 292 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC113420.1-201ENST00000507903 571 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 OR8A2P-201ENST00000528631 952 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC007834.2-201ENST00000536310 343 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 CYB5AP5-201ENST00000549779 389 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AGGF1P6-201ENST00000569213 976 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC091057.2-201ENST00000602594 792 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 SUMO2P15-201ENST00000604285 278 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC025588.2-201ENST00000604851 466 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AL135786.2-201ENST00000608422 615 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AC025574.2-201ENST00000615621 514 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 AL512506.2-201ENST00000624472 458 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 HSPD1P11-201ENST00000508643 1702 ntBASIC5.64□□□□□ -1.51
DKK3Q9UBP4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
DKK3Q9UBP4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AC002525.1-201ENST00000624392 1622 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 RN7SKP160-201ENST00000363804 340 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 SNORD56.4-201ENST00000363883 71 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 RNU2-17P-201ENST00000410290 190 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 METTL15P3-201ENST00000415522 1221 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 OR2X1P-201ENST00000421144 687 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 HIGD1AP4-201ENST00000430194 280 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AL390119.1-201ENST00000440329 312 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 MTCO3P28-201ENST00000513351 515 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 MRPS36P3-201ENST00000519284 130 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 PMS2P3-207ENST00000529061 717 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AC137627.1-201ENST00000545761 289 ntBASIC5.63□□□□□ -1.51
DKK3Q9UBP4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.63□□□□□ -1.51
DKK3Q9UBP4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms